Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00132 ATGGAAGGAAGGATAGGGCAGAACTCAGTTCCTCTTCATGGTTCCATTGATAAGTCTAGGATTCTGGATGTTAAGCCTCTGAAGAGTTTGATTCCTATTTTCTCCATGTCTTCTCAAACTCCACCTCTTGGCCAGTATCCTTCTGGGTTTTCTCCATTTTTCCCTTTTGGTGCACCTCAGCAAACTCCAACTGAGGTGACACCAAATGGTGCTGCTACTCCAATAAGGGCATATAGGAGTCCACCATGGGCAGGAGACACCAGTTCAACCATGGAGGGGTTCAGTGATCAACATTCTTCTGGGAAGAAAAAACGTGGATCACCAAAGTCGCACAGTGCCAAATCATCCTTAGATAAGCCTAAGAAAAGTCAAGAGCCCCCTGTTGATTTAGATGCTTTAGTTGGTATTAGCCCTGCTCAAAAAGATGATGGTAGCCGTGAAGTGGTTAATTTTGTGCTCATGGCGTTTGATGCTCTTAGAAGAAGGCTCTGCCAACTTGAAGAGGCCAAGGAATTGAGCTTGGGTTCGGTCAAGCGTGCAGATTTGAAAGCTTGCAGTACTTTGATGACCAGAGGAATCCGGACAAACATGAGGAAGAGAGTAGGATCAGCTCCTGGGGTTGAGATTGGGGACATTTTCTTTTTCAGAACAGAAATGTGTGTTGTGGGTTTGCATGCTCCCTCCATGAGTGGAATTGATGCCTTGCATATTATGGGTGAGTTTGAGGAGGAAACTCTGGCTGTGAGCATTGTTTCATCAGGAGAATATGATGATGATGCTGAGGATATCGATGTTATAACTTATACTGGTCAGGGAGGGAACTTCTTCAAGAAAGATAAGCACGCTATTGACCAGAAGCTTCATAGGGGTAATCTTGCTTTGGATAGGAGTTCTCGAAAACTCAATGAAATAAGAGTCATCCGGGGCATTAGGGATGAGGTGAATCCAAATGCAAAAATCTATGTCTACGATGGTCTGTATAAAATCGAAGATTCATGGATTGGAAAAGCAAAAGGTGGTGGTGATGTATTTAAGTATAAGTTGGTAAGAATGCCTGGACAGCCTAGTGCCTATTCTGTTTGGAAATCAGTTCAGAAGTGGAAATCTGGCTCAACAAGGACTGGACTTATTCTTGCAGACATTTCCAATGGAGCTGAGAGTATTCCTGTAGCACTTTTCAATGAGGTTGATAATGTGAAGACACCTATTTATTTCAATTATTTCCATTCTCTTAGACACCCTAAATCATTCCGTTTGATGGAGCCTTCAAATGGGTGCACCTGTACTAAAGCTTGTGTCCCAGGTGATTTGAACTGTTCTTGCATTAGGAGAAATGAAGGTGATTTCCCATATACTGGAAATGGTGTTCTGGTGAACCGGATGCAATTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTTCCTAACTGCAAAAATAGAGTATCCCAAACTGGTTTAAAGCACCAAATGGAAGTGTTCAAAACTAAGGATAGAGGGTGGGGTCTTCGGTCTCTGGATCCTATTCGTGCTGGTACTTTCATTTGTGAATATGCTGGAGAAGTTGTTGATAGAGCCAAGGAAAGTGAGCTTGTGAGGGAAGGAAATGAGTATGTTTTTGATACAACTCGGATTTATGGTCAATTCAAGTGGAATTATGAGCCTAGGCTTTTGGAAGAAGTCAATCCCAATGAATCCAGTGAGGATTATGCCATGCCGTATCCTTTAGTTATAAGTGCCAAGAATTTTGGGAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCTGTGGTATATGAAGAAAACAACCAATCGTACCTACATGTTGCCTTTTTTGCACTCAGACACATTCCACCAATGACAGAGTTAACATATGATTATGGAGTTGCCCGATCTGATCTTGCTGAGGGTATCAGTGCAGCCAAAGGGAGAAAGAAATGCTTATGCCAATCATTAAAATGCTGTGGTTTTTATGGTTAA 1995 0.4241 MEGRIGQNSVPLHGSIDKSRILDVKPLKSLIPIFSMSSQTPPLGQYPSGFSPFFPFGAPQQTPTEVTPNGAATPIRAYRSPPWAGDTSSTMEGFSDQHSSGKKKRGSPKSHSAKSSLDKPKKSQEPPVDLDALVGISPAQKDDGSREVVNFVLMAFDALRRRLCQLEEAKELSLGSVKRADLKACSTLMTRGIRTNMRKRVGSAPGVEIGDIFFFRTEMCVVGLHAPSMSGIDALHIMGEFEEETLAVSIVSSGEYDDDAEDIDVITYTGQGGNFFKKDKHAIDQKLHRGNLALDRSSRKLNEIRVIRGIRDEVNPNAKIYVYDGLYKIEDSWIGKAKGGGDVFKYKLVRMPGQPSAYSVWKSVQKWKSGSTRTGLILADISNGAESIPVALFNEVDNVKTPIYFNYFHSLRHPKSFRLMEPSNGCTCTKACVPGDLNCSCIRRNEGDFPYTGNGVLVNRMQLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDRAKESELVREGNEYVFDTTRIYGQFKWNYEPRLLEEVNPNESSEDYAMPYPLVISAKNFGNVARFMNHSCSPNVFWQPVVYEENNQSYLHVAFFALRHIPPMTELTYDYGVARSDLAEGISAAKGRKKCLCQSLKCCGFYG 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00132 664 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 58 664 IPR025794 GO:0016571
Phco10g00132 664 MobiDBLite consensus disorder prediction 111 126 - -
Phco10g00132 664 Pfam Pre-SET motif 381 480 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phco10g00132 664 ProSiteProfiles Pre-SET domain profile. 424 485 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phco10g00132 664 Gene3D SET domain 371 663 IPR046341 -
Phco10g00132 664 SUPERFAMILY SET domain 387 661 IPR046341 -
Phco10g00132 664 ProSiteProfiles SET domain profile. 488 633 IPR001214 GO:0005515
Phco10g00132 664 MobiDBLite consensus disorder prediction 57 129 - -
Phco10g00132 664 Pfam SAD/SRA domain 201 354 IPR003105 -
Phco10g00132 664 SMART G9a_1 197 354 IPR003105 -
Phco10g00132 664 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 99 656 - -
Phco10g00132 664 Pfam SET domain 499 633 IPR001214 GO:0005515
Phco10g00132 664 ProSiteProfiles YDG domain profile. 202 350 IPR003105 -
Phco10g00132 664 SMART set_7 488 639 IPR001214 GO:0005515
Phco10g00132 664 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 185 369 - -
Phco10g00132 664 Gene3D - 184 370 IPR036987 -
Phco10g00132 664 SUPERFAMILY PUA domain-like 184 371 IPR015947 -
Phco10g00132 664 SMART preset_2 378 472 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00132 Phco-Chr10 1044284 1046278 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco10g00132 SAD_SRA 2.7e-45 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00132 10 1044284 1046278 Phco9g02063 9 45654175 45656187 PCT