Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00121 ATGGGGTCTCAAGGAGGTGGTGATAATAATGAAAAACATTCACTACACCACTCTTTGGTGCGACAAAATTCCTTGTACGGTCTCACACTCAATGAAGTTCAGAATCAATTAGGTGACACAGGAAAATCACTAAGTAGCATGAACATTGATGAGCTTCTAAAAATTGTGTACACTGCTGAAGCAAACCAATCTACTATTGAAGCTAGTTTTTCCTTAACTAGTTCTCTGAGTAAGAAAACTGTTGATGAGGTTTGGAGAGACATACAAGGAAGCAAAGATAATAAGGAGAAGAAGTGTCAAGAAAGACAACCTACATTGGGAGAGATGACATTGGAGGATTTCTTGGAGAAAGCAGGGGTTGTTGTTGAACCATCTTCTACTGCAGTTGTAGATCCAAATGTAATGACACCACAATTTCCTCAACATGGTCCTTGGATGCAGTGTCCACAAGCACAATACCAACTTTCACAACAAGGTTTAATGGGAATTTACATGACTAGTCAGAACATAACACAGTCATTACACACACAAGGTAATGCTACATCAGATGGATATGCAGATGGTGAGGTGGCATTGCCTTCACATGTTATGGGAAGCTTAACAGATACTAGGAGACATGGTCGAAAACGGGGCAGATCAGAAGATATGGTAGACAAGACCTTTGAGAGGAGACAGAAAAGGATGATCAAGAATCGTGAATCTGCTGCACGTTCTAGAGCAAGGAAACAAGCTTACACAATTGAATTGGAGCATAAAGTATTGCATCTAGAAGAAGAAAATGAAAAGCTAAGGAGACAAAAGGAGGTAGAGAACATATTATCAAGTGTGCCAACTCAAAAACCAAGATACCATATTCGTCGAAGTGCATCGGCTTCATTTTGA 882 0.398 MGSQGGGDNNEKHSLHHSLVRQNSLYGLTLNEVQNQLGDTGKSLSSMNIDELLKIVYTAEANQSTIEASFSLTSSLSKKTVDEVWRDIQGSKDNKEKKCQERQPTLGEMTLEDFLEKAGVVVEPSSTAVVDPNVMTPQFPQHGPWMQCPQAQYQLSQQGLMGIYMTSQNITQSLHTQGNATSDGYADGEVALPSHVMGSLTDTRRHGRKRGRSEDMVDKTFERRQKRMIKNRESAARSRARKQAYTIELEHKVLHLEEENEKLRRQKEVENILSSVPTQKPRYHIRRSASASF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00121 293 SUPERFAMILY Leucine zipper domain 223 268 IPR046347 GO:0003700|GO:0006355
Phco10g00121 293 CDD bZIP_plant_BZIP46 223 268 - -
Phco10g00121 293 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 266 IPR004827 GO:0003700|GO:0006355
Phco10g00121 293 SMART brlzneu 219 285 IPR004827 GO:0003700|GO:0006355
Phco10g00121 293 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 221 273 - -
Phco10g00121 293 Coils Coil 246 273 - -
Phco10g00121 293 Pfam bZIP transcription factor 223 266 IPR004827 GO:0003700|GO:0006355
Phco10g00121 293 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 226 241 IPR004827 GO:0003700|GO:0006355
Phco10g00121 293 Gene3D - 222 274 - -
Phco10g00121 293 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 277 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00121 Phco-Chr10 978813 980619 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco10g00121 bZIP_1 8.7e-14 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00121 10 978813 980619 Phco10g00121 10 978813 980619 ECH
Phco10g00121 10 978813 980619 Phco9g02032 9 45302891 45305766 PCT