Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04034 ATGGCTTCTTTTCCTCTTTACCAGCCAACCCACTCCATTTTCTCCAACACCCAGGTCAAGGGCTTGCACTTGCACGGTGGCTTTTTCTGGCGACCCACTTACTCCTTTGGGACTCTTGCAGAAAACAAAGCACGACCCATCAAAGCTTCGGTTGCTAAATCCTCATTTCCCCTGTTTCAGCCTCCCCAAGTTGAAGAAGAGTCACCGTCTGAGTTGGAGCCTGTGGATCCTGACTTCTACAAGATTGGGTATGTCCGAAGCATGCGAGCTTATGGAGTTCAATTTAAAGAAGGGCCAGATGGTTGGGGTGTATATGCTTCCAAAGATGTAGAACCTCTTCGTCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTCCCATGGATGTTTTTCCCGAATATAATTCCCTTGGATCATCCAATATTTGATATTATTAACTCGACAAATCCAGAGACAGATTGGGACCTCAGGTTAGCATGCCTTCTCTTATTCGCATTTGACTGTGAAGGTAACTTCTGGCAATTGTATGGTGACTTCTTACCGAGTGCAGATGAGTGCACTAGCCTACTTCTGGCTTCAGAGGAAGAACTTTTGGAGCTACAGGATCCCAATCTTGCTTCCACTATTAGAGAACAGCAACAGCGAGCCTTAGAATTCTGGCAAAATAATTGGCACAGTGATGCACCTCTTAAAATAAAGCGTCTTGCTCGTGATCCACAAAGGTTCATTTGGGCAGTAAGTATTGCACAGTCACGATGTATTAACATGCAAACGAGAATTGGTGCTCTAACTCAAGATGCAAACATGCTGATTCCTTATGCTGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTCATAAATGCAGGACATCGCGTTAGAAAGGGAGATGAGATGACAGTTAATTACATGAGCTCGCAGAAGAACGATACGTACATGCAAAGATATGGATTTTCATCACCTGTGAATCCATGGGATGAGGTACAATTCTCAGGCAATGCACGTATTCATTTGGATTCCTTCTTGTCAATCTTCAATATATCTGGCCTTCGTGAAGAGTATTACCATAACAATGGTCTGTCAAAGGCTGGCGATACTTTTGTTGATGGAGCAGTCATAGCTGCGGCACGAACATTGCCAAGTTGGTCAGATGGGGATTTGCCTCCAATCCCTAGTGTGGAAAGAGAGGCTGCGAAGGAGTTGCAAAATGAATGCCAAAAGATGCTCGCAGGATTTGCTACAAGCTCTAAGCAAGACCAGAAATTGCTGGATTCCATGACAGATGCCACGAGGACACTTGAAGCTGCAATTAAGTATAGATTGCACAGAAAATTGTTGATGGAGAAAGTTAGCAAAGCATTAGAGATGTACCAAGAGAAGATACTGTTCTGA 1455 0.4351 MASFPLYQPTHSIFSNTQVKGLHLHGGFFWRPTYSFGTLAENKARPIKASVAKSSFPLFQPPQVEEESPSELEPVDPDFYKIGYVRSMRAYGVQFKEGPDGWGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPNIIPLDHPIFDIINSTNPETDWDLRLACLLLFAFDCEGNFWQLYGDFLPSADECTSLLLASEEELLELQDPNLASTIREQQQRALEFWQNNWHSDAPLKIKRLARDPQRFIWAVSIAQSRCINMQTRIGALTQDANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGHRVRKGDEMTVNYMSSQKNDTYMQRYGFSSPVNPWDEVQFSGNARIHLDSFLSIFNISGLREEYYHNNGLSKAGDTFVDGAVIAAARTLPSWSDGDLPPIPSVEREAAKELQNECQKMLAGFATSSKQDQKLLDSMTDATRTLEAAIKYRLHRKLLMEKVSKALEMYQEKILF* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04034 484 CDD SET_LSMT 92 339 - -
Phac9g04034 484 Pfam SET domain 101 324 IPR001214 GO:0005515
Phac9g04034 484 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 70 460 - -
Phac9g04034 484 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 336 478 IPR036464 -
Phac9g04034 484 Gene3D set domain protein methyltransferase, domain 1 85 339 - -
Phac9g04034 484 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 85 339 - -
Phac9g04034 484 SUPERFAMILY SET domain 100 340 IPR046341 -
Phac9g04034 484 FunFam Plastid transcriptionally active 14 361 481 - -
Phac9g04034 484 Gene3D - 362 482 IPR036464 -
Phac9g04034 484 ProSiteProfiles SET domain profile. 80 325 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04034 Phac-Chr9 38598149 38607653 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac9g04034 SET 1.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04034 9 38598149 38607653 Phac9g04034 9 38598149 38607653 ECH