Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04023 ATGGCAAGAACATGTTTTACCTGCTCCTTGCTTTTGGGGATGGCTTGTTCCATAGTAATTGGTGCATATGAAGAGAGCTTGTATCCTAGGACAATTTCTAGGGGCAACTATCATGAAGCAATACAACGGTTGCAGTCATTTAAGGCCTCTCTAACTACACGTGATTCCATTGCTTCACCACCATCTTCCTTATCACCCTTCTCAAGCCCTCCTGCTCCTGCTCCTTCTCCTTCTCCTTCTCCTCTCTCACTTCAGGGAGTGAACTATCCACGTGTGTACCATGTCACATCTTATGGTGCAGATCCAACGGGTAGTTCAGATAGCACTGAAGCACTCCTTGCAGCCATAGCAGATGCAGCCAAGGGTCCCAGTGAAGGATATTTGATGCAAGGCATCAAAAACCTTGGAGGTTCCCAGATTAATCTCGAGGGTGGAAACTACTTGATCAGCCAACCACTGCGGTTGCCGGTGGCTGGAGTGGGGAACCTTATGATACATGGGGGGACTATAAGAGCCTCGGATGGTTTTCCAGCAGATAGCTATATCATTGATTTGTCACCCCTTTCCAATGAAGGAAACAGAGAGAGTTCTTCAACATCCTACAATTTTGAGTTCATAACTTTCAAAGACCTCTTGTTGGACTCAAACTTCAGGGGTGGAGGCATTTCAGTCATAAACTCACTTCGGATTAGCATAGACAACTGCTACATCACACATTTCACCACCAATGGAATTTTAGTCCAAGGTGGCCATGAAACCTACATCAGAAACACTTTCCTTGGTCAGCATATAACTGCTGGTGGGGACAAAAATGAAAAAGACTTCTCAGGCACAGGAATAAACCTCCAGGGTAATGACAATGCTGTCACAGATGTTGTAATTTACTCTGCTGCTATAGGAATAATGGTTACTGGTCAAGCCAATGCTTTTTCTGGTGTACATTGTTACAACAAGGCCACTGGCTTTGGAGGCACAGGGATTTATTTGAAGGTACCAGGTTTAACACAAACAAAGATTGTGAATTCTTACATGGATTTCACTAACATTGTGGCTGAAGACCCGGTTCAATTCCACGTCTCTAGTTGTTTCTTCCTTGGTGATGCCAACATTGTCCTGAAGTCCAAGAATGGGGTTATAAATGGTGTTGATATTGTTGATAACATGTTCTCAGGTTCAAATGATGGGGTTGAAATTGTTGAGCTGGACCAATCCAACAATCCTTTCCATCAAATTGAACAAGTCATTGTTGACAGAAACAATGCAAGAGGGATGAAGTTAAAGGCCACAGTTGCAAAAGGGTCCATGCAAGGGAATGGAACCTCATGGACTGTTGATTTTAACAATGTTTTGCTTTTTCCTAACCTTATAAAACATGTTCAGTACTCTGTAAGCACCCCTGGCAGCACCTTCCCAAATCATATTCTGAGGAATGTGTCTGAGAATCGTGTTGTGATTGAAACAAACAAAGCAGTGCCTGCCAGTGTTTTTGTTTCTGTGGATCAAAGTGAGGCAATTTGA 1518 0.4328 MARTCFTCSLLLGMACSIVIGAYEESLYPRTISRGNYHEAIQRLQSFKASLTTRDSIASPPSSLSPFSSPPAPAPSPSPSPLSLQGVNYPRVYHVTSYGADPTGSSDSTEALLAAIADAAKGPSEGYLMQGIKNLGGSQINLEGGNYLISQPLRLPVAGVGNLMIHGGTIRASDGFPADSYIIDLSPLSNEGNRESSSTSYNFEFITFKDLLLDSNFRGGGISVINSLRISIDNCYITHFTTNGILVQGGHETYIRNTFLGQHITAGGDKNEKDFSGTGINLQGNDNAVTDVVIYSAAIGIMVTGQANAFSGVHCYNKATGFGGTGIYLKVPGLTQTKIVNSYMDFTNIVAEDPVQFHVSSCFFLGDANIVLKSKNGVINGVDIVDNMFSGSNDGVEIVELDQSNNPFHQIEQVIVDRNNARGMKLKATVAKGSMQGNGTSWTVDFNNVLLFPNLIKHVQYSVSTPGSTFPNHILRNVSENRVVIETNKAVPASVFVSVDQSEAI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04023 505 SMART pbh1 284 305 IPR006626 -
Phac9g04023 505 SMART pbh1 227 249 IPR006626 -
Phac9g04023 505 SMART pbh1 374 400 IPR006626 -
Phac9g04023 505 MobiDBLite consensus disorder prediction 55 81 - -
Phac9g04023 505 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Phac9g04023 505 PANTHER POLYGALACTURONASE QRT3 32 503 IPR039279 GO:0004650
Phac9g04023 505 SUPERFAMILY Pectin lyase-like 91 478 IPR011050 -
Phac9g04023 505 MobiDBLite consensus disorder prediction 64 80 - -
Phac9g04023 505 FunFam Polygalacturonase QRT3 95 496 - -
Phac9g04023 505 Pfam Pectate lyase superfamily protein 95 321 IPR024535 -
Phac9g04023 505 Gene3D - 92 500 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04023 Phac-Chr9 38535514 38538249 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04023 9 38535514 38538249 Phac9g04023 9 38535514 38538249 ECH