Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01770 ATGCCTTCAACTGCATCTGTCTCGCCATTTCAATACCAATATCACGACACTGGTCTCTTACCTCTAATGACTGAATTTTCAAACCTAAAGGGAACTTTGTCTCTCAAAGATGATGAGGCTTATAACCTACGTGAAGATTTTAGAAGTGATGGATGCATGGGATCTGTGTCTTCTGGAGGCTTTCATGAGATTATAAAAAAGGAGAGTTTTTACAACCCCCACCCCTCAATGTGTCTTAAAGAAGTCCCCTCCGATCTGCCGGGTTACTCCAACAGTATTTTAAACTCCCAATACCTTAGGGCGGCACAAGAGTTGCTTGATGAAATAGTTAGTGTCCGAAAGGCTTTGAAGCAACCTGGAATGGAAAAACAAGATAACGACCGTGACATTGGATTAGATGGCTCTAAAAATTCTTATGAAAAATCTACCCAAATGTCTTCAGGACCTATTGGTGAACTATCATCTGCAGAACGGCTGAACTTGTTAGACAAGAAAACAAAGCTTTTATCCATGCTGGATGAGGTGGATAAAAGATACAGACAGTACTGCCATCAGATGCAGATTGTGGTGTCATCTTTTGACATGGTTGCTGGGTTTGGAGCAGTAGAACCATATACAGCACTTGCTTTAAGAACAATTTCTCGCCACTTTCGGTGTTTGCGTGATGCCATCAGTGGCCAAATTCAAGTGACGCAAAGGAGCCTTGGGGAGCAAGAGGGAATACCCCGTCTCCGCTATGTGGATCAGCAACTCAGACAACAAAAGGCCCTTCAGCAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAAGTTCTGTTTCAATACTTCGTGCTTGGCTCTTCGAACATTTTCTTCATCCTTATCCCAAGGATTCCGAGAAAATTATGCTGGCTAGACAAACAGGCTTGACCAGAAACCAGGTAGCAAATTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAACGAAGAGTTTGGAGATTTCGAGATGAACTGCAACCTTTCATCTGAGAACACGGTCAAAGGTAAGAGGGATGATGTTCAGGAGTCTGATAGCAATTTAGTAACTGTTGATAGTGCCCAACTCCAACCTCAAGCCGAACTGGATAGGGGGGTCAATGCAGAAAATATGGTGATGAATTCTGGAACTGAGAAATTTCAGGGTGACCAGAACCTAAGGCTTGGCATGAATAACATTAACAGCAGCAGCAACAACAACCTTCATTCTATCTCGACAAATCCGAACGGTGGCTACGGGAGCCTAATAGGTTCTACTCATGCCACATATGATTTATCAGAGTTGGGTAACTTTACTGTGGGAGGCCACGTTTCGCTTGCATTGGAGTTGAGAAACTGTGAAAGTGATGGGTTTTCCATGTCTGAGGATGCCATCCACAAACGAGGTAATCAAACATTGGCCTCTTCCCCGGAGACTGATTTACTAGATTATCATTTCACGGATTCAGGAAAGCAACAACACAGGTTTGGCAATCCCCATTTGCTGCATGAGTTTGTCGTATGA 1557 0.4387 MPSTASVSPFQYQYHDTGLLPLMTEFSNLKGTLSLKDDEAYNLREDFRSDGCMGSVSSGGFHEIIKKESFYNPHPSMCLKEVPSDLPGYSNSILNSQYLRAAQELLDEIVSVRKALKQPGMEKQDNDRDIGLDGSKNSYEKSTQMSSGPIGELSSAERLNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGFGAVEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYNEEFGDFEMNCNLSSENTVKGKRDDVQESDSNLVTVDSAQLQPQAELDRGVNAENMVMNSGTEKFQGDQNLRLGMNNINSSSNNNLHSISTNPNGGYGSLIGSTHATYDLSELGNFTVGGHVSLALELRNCESDGFSMSEDAIHKRGNQTLASSPETDLLDYHFTDSGKQQHRFGNPHLLHEFVV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01770 518 Gene3D - 264 340 - -
Phac9g01770 518 Pfam Associated with HOX 93 225 IPR006563 -
Phac9g01770 518 SMART HOX_1 267 331 IPR001356 GO:0003677
Phac9g01770 518 MobiDBLite consensus disorder prediction 118 135 - -
Phac9g01770 518 CDD homeodomain 267 328 IPR001356 GO:0003677
Phac9g01770 518 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 358 - -
Phac9g01770 518 ProSiteProfiles 'Homeobox' domain profile. 264 327 IPR001356 GO:0003677
Phac9g01770 518 MobiDBLite consensus disorder prediction 136 150 - -
Phac9g01770 518 SMART prehox3 87 226 IPR006563 -
Phac9g01770 518 SUPERFAMILY Homeodomain-like 268 335 IPR009057 -
Phac9g01770 518 FunFam BEL1-like homeodomain protein 4 270 332 - -
Phac9g01770 518 Pfam Homeobox KN domain 284 323 IPR008422 GO:0003677|GO:0006355
Phac9g01770 518 MobiDBLite consensus disorder prediction 118 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01770 Phac-Chr9 14317135 14325859 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac9g01770 POX 1.8e-48 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01770 9 14317135 14325859 Phac9g01770 9 14317135 14325859 ECH
Phac9g01770 9 14317135 14325859 Phac1g00248 1 1595090 1612544 PCT