Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01605 ATGCAAACGGTGGGGAGAATACTGAGTCAGGGCGTGTATACGGTTTCGGGCCCGTTTCATCCGTTCGGTGGCGCCGTCGATATTGTGGTTGTGGAACAGCAAGATGGAAGTTTCAAGTCCTCGCCCTGGTACGTTCGATTCGGCAAATTCCAGGGGGTTTTGAAGTCGAGGGAAAAGGTGATTGATATCTCTGTCAATGGGGTGCGTGCTGGTTTCCAAATGCATCTCGATCACAAGGGGGAAGCTTACTTTCTCAGGGAAATCGTTGCACAAGAAGAAGACAATTTGATGTTTCCGTCTTCTTCGTCTCCTACATGCGATGCTAAAAGTGATCACTCTCGCAGGTCCAGGAGTTGCGATTATGACGGTGGAGATGATGTGGCAAAGACTGGTTCTCGCCGTTCCAGAATACTTGGCTTTGTGTTTGGGAGGAGGTCTTTGAAGCAGAGAGCGGGTAATGGTGATGGGATTGGGAACAGGGTGGGTTCGTTGGAGCGTGCTGAGATTGCGGCTAACTTGTTAGACCTCAAGTGGTCCACTAATCTCTCCGGGGAACAAGGGCAAGAGGTTCTTGCTACCTCGTCTGGGGATGGTAACGCGGTCGTGAACGATGGTGAGTTGAAAGAGGGAGCTTGTCTTGGTCGTGAGTGTGACTTGAATGGGAAGGAAGTTGTGTATGATATTGCAGAGTCTGACGTGCAAGTTGCGTGCGTGAAGGTGAAGCTTGTGGAAAAGGAATTGAACGGAGAAGAAGTTTCTGGTGGTAGCACTGTTGATTCATCGGGTGATAATAGTAATGATATTTCCAAAGAGGATGTTTCGGCTGATGGGGTTTGCCGTGAAACACCAGAGACTTCCAAGTTGGGCGTGTCTTGTTCTAGTGAACACGCTCAAGAGGTGGTGTACCTTGCTGGCGCAGCAGGATGTGAAGAAGTCCGCGTCCATGTCCATGATGAAGTCTTGCATCGTGCAACTGTACTGCTATCTGAGGGTACACAAGCTGTGGAAGTTATTGAGAAAGCTGATCTTGGGATGCCGGTATTGGGGATCTCTGAGTTCCATTCTGGGGTTCAGCAAATAAATTGTTTGGATTCTGGTGATATTATGTATAATGAGGTGGATATTGAAGAGCAATCAATATCTCCAAAACCTCAAACTTTTAGCCTAGGACATTGTTCAGGCGAGAAAGTTGAGCCCAATTTACCTTCCAGCTACAGCATTCTGCATGACCAAGCCATAAGCGAGAATATGATGCACAAGGACGTCTCCATCTCATTATCGACTCCTCTGGACTCTGTTGATGATTGTCTACCTAGAAAAGCATCAAGGAGATCACCATCACCAAGTTCAGAGGATCAAAATTTCCTTTTCACTGACCTTGATGAAATTGTAATCAATGATCGATCAGAGAGAACACACTTCCCTGAACATTTAGATAAAGAAGATCGTGTTTCTTATGAGGATGACACTGAAAAGTTAACAGCAATATCCGGTCCCATAGCCATTCGTAGAAATGAAGCTGCTGGAGAGAAAGTTGGGCAACATTCGGGATCCTTGCCAAATCTTTCTTTTGGTAGTGACATTGTGGTCCAACATGATGTTCGTTATCCTTTAAGTCAATCACTGGACTCAAAATCAAAATCCTTGCCATGTGAATTTCCTCGAAAAGATGATTTAGAATGTCAAAAACCGGATGAAGACAAAGGAAACCACCTAACACCCGAGGAGTCAGGTGCCAAGGATTATCATGATTCTGGGGAAATCAAAGGAGATGATCCATCAACACACAACCCTTCCCCTGCTGGAAACTGGAGACTTTGGCCTTTCTCCTCGAAGAGAACAGGATCTAAAGATTCTATGTTGCCGCCTTCTCTAAGTGATGTCAAAACCACTACTGATGGTAATTGTCTAGAGAATACGATTAGCACAGCTATAAACAAAGATAAACCCAAACCCAATTTTAAAAAAATAAAGGTTAGGGAAACAACTCCAACTTCTGAACAGGTAGCCTCCTTGAATCTGAAGGATGGGATGAATACCGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAATCAGCAGGTTGACGCTCGAATATATCTGTGGAAATGGAACACTCGCATAGTGATCTCTGATGTAGATGGTACAATTACAAGGTCGGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTGGCACATTTATTCTCGGCTATTAAGGAGAATGGTTACCAACTTCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTACCTTACACGACAATTCCTTGTTAATCTTAAACAGGATGGAAAAGTTTTACCAGATGGTCCTGTTGTTATTTCTCCAGATGGACTTTTTCCCTCTCTATATCGGGAAGTTATTAGGAGGGTTCCCCACGAATTCAAAATTGCATGCTTAGAGGTCATCAAGGATCTTTTTCCTTCTGATTGCAATCCTTTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATTCCCTTGGGAAAAATCTTCATAATTAATCCCAGGGGAGAGGTTGTTGTAAACCGTCGCGTTGACGCAAAATCATATGCTTCTCTGCATGCTCTCGTGAATGGGATATTCCCCCCTCCGAACTCTTCTGAACAGGTTTTATCTTGA 2685 0.4466 MQTVGRILSQGVYTVSGPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLKSREKVIDISVNGVRAGFQMHLDHKGEAYFLREIVAQEEDNLMFPSSSSPTCDAKSDHSRRSRSCDYDGGDDVAKTGSRRSRILGFVFGRRSLKQRAGNGDGIGNRVGSLERAEIAANLLDLKWSTNLSGEQGQEVLATSSGDGNAVVNDGELKEGACLGRECDLNGKEVVYDIAESDVQVACVKVKLVEKELNGEEVSGGSTVDSSGDNSNDISKEDVSADGVCRETPETSKLGVSCSSEHAQEVVYLAGAAGCEEVRVHVHDEVLHRATVLLSEGTQAVEVIEKADLGMPVLGISEFHSGVQQINCLDSGDIMYNEVDIEEQSISPKPQTFSLGHCSGEKVEPNLPSSYSILHDQAISENMMHKDVSISLSTPLDSVDDCLPRKASRRSPSPSSEDQNFLFTDLDEIVINDRSERTHFPEHLDKEDRVSYEDDTEKLTAISGPIAIRRNEAAGEKVGQHSGSLPNLSFGSDIVVQHDVRYPLSQSLDSKSKSLPCEFPRKDDLECQKPDEDKGNHLTPEESGAKDYHDSGEIKGDDPSTHNPSPAGNWRLWPFSSKRTGSKDSMLPPSLSDVKTTTDGNCLENTISTAINKDKPKPNFKKIKVRETTPTSEQVASLNLKDGMNTVTFTFSTAVLGNQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYLTRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEVIKDLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVVNRRVDAKSYASLHALVNGIFPPPNSSEQVLS* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01605 894 Pfam LNS2 (Lipin/Ned1/Smp2) 662 884 IPR013209 -
Phac9g01605 894 SMART lns2 708 864 IPR031315 -
Phac9g01605 894 SUPERFAMILY HAD-like 700 852 IPR036412 -
Phac9g01605 894 PANTHER LIPIN 1 885 IPR026058 -
Phac9g01605 894 MobiDBLite consensus disorder prediction 541 609 - -
Phac9g01605 894 MobiDBLite consensus disorder prediction 250 279 - -
Phac9g01605 894 MobiDBLite consensus disorder prediction 99 127 - -
Phac9g01605 894 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Phac9g01605 894 MobiDBLite consensus disorder prediction 549 591 - -
Phac9g01605 894 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01605 Phac-Chr9 13231025 13240270 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01605 9 13231025 13240270 Phac9g01605 9 13231025 13240270 ECH
Phac1g00274 1 1722591 1728309 Phac9g01605 9 13231025 13240270 PCT