Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00855 ATGCCAAGCCCAAAGCAGCTTCTGCAGGCTACAGTTTTGCTCTCGTTACTTGTTCAGGCCCTGTGCAAATCCACCATCGAGCCATGTTCCAACTCCGACTCATGCAACGCGCTTCTGGGATACACCCTTTACACTGACCTCAAAGTCTCCCAAGTGGCGTCGCTCTTCCAAATCGACCCCATCGCGCTTCTCACCGCCAATGCCATCGACATCTCCTACCCCGACGTCGAGCACCACATCCTCCCTTCCAACCTCTTCCTCAAGATCCCCATTTCCTGCTCCTGCGTCGACGGCATTCGCAAGTCCGTCTCCACCAACTACAAGACTCGCCCCTCCGACACCCTCTCCTCTATCGCCGACTCCGTCTACGGCGGCCTCGTCTCCTCCGACCAGCTACGTGAGGCCAATTCCATTCCCGACCCCTCCGTCCTCGATGTGGGTCAGAACCTCGTCGTGCCTCTCCCCTGCACCTGCTTCAACGGCTCCGACAACTCTCTCCCTGCCATTTACCTCTCTTACGTCGTTCGCCCCGTTGATTCCCTCGCTGCCATTGCTGCCAGGTACTTCACCACGCTCACAGATTTGATGAATGTCAATGCCATGGGAAGCACTGCTATTAACGACGGGGATATCCTTGCTGTTCCAATACCCGCCTGTGCTTCGAATTTCCCTAAATCCGCCTCTGATTTTGGCTTGCTTGTCCCCAATGGAAGCTATGCCATTACCGCGGGACACTGTGTCCAGTGTAGCTGTGGTCCGAGAAACCTCAATTTGTACTGTATGCCGGCTTCCCTCGCTGTTTCTTGCTCCAGCATGCAATGCAGAGGCAGCAATCTTATGCTTGGGAATGTTACAGTGCAGCAGACTAGTGGTGGTTGCAATGTTACTTCTTGCAATTATGATGGCATTGTTAATGGCACCATAGCAACAACGTTGTCCCCTTCTCTTCAGCCTCGATGTCCAGGTCCACAGGAATTCCCTCCTCTTGTTGCCCCTCCTACCACCGTTGCAAAAGACACAGTGTTTGGACCAGCACCAGCACCACTGTTCGATGGAGCAGGTCCTACATCACCCATTCCCTCACTAGTTCCTTCATCGGGGCTTCCAGGTTTCTCTCCTGCAAATGGTCCTATTAGTGGCATTTCTTCTGGTGCTTCTGCTGCATGCTCCTTGGTGAAACCATTACCCATTTTGACGCATGCACTTGTGTTATTGCTTGTCAAGTTGATGATACCTGTGGCATTGTAA 1248 0.5312 MPSPKQLLQATVLLSLLVQALCKSTIEPCSNSDSCNALLGYTLYTDLKVSQVASLFQIDPIALLTANAIDISYPDVEHHILPSNLFLKIPISCSCVDGIRKSVSTNYKTRPSDTLSSIADSVYGGLVSSDQLREANSIPDPSVLDVGQNLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDSLAAIAARYFTTLTDLMNVNAMGSTAINDGDILAVPIPACASNFPKSASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCRGSNLMLGNVTVQQTSGGCNVTSCNYDGIVNGTIATTLSPSLQPRCPGPQEFPPLVAPPTTVAKDTVFGPAPAPLFDGAGPTSPIPSLVPSSGLPGFSPANGPISGISSGASAACSLVKPLPILTHALVLLLVKLMIPVAL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00855 415 CDD LysM 107 152 IPR018392 -
Phac9g00855 415 Gene3D LysM domain 161 226 IPR036779 -
Phac9g00855 415 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 324 - -
Phac9g00855 415 SUPERFAMILY LysM domain 171 216 IPR036779 -
Phac9g00855 415 CDD LysM 172 214 IPR018392 -
Phac9g00855 415 Pfam LysM domain 173 215 IPR018392 -
Phac9g00855 415 Pfam LysM domain 107 153 IPR018392 -
Phac9g00855 415 ProSiteProfiles LysM domain profile. 105 152 IPR018392 -
Phac9g00855 415 Gene3D LysM domain 99 159 IPR036779 -
Phac9g00855 415 SMART LysM_2 172 215 IPR018392 -
Phac9g00855 415 SMART LysM_2 106 153 IPR018392 -
Phac9g00855 415 ProSiteProfiles LysM domain profile. 171 214 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00855 Phac-Chr9 6437119 6439825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00855 15 390 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 71.504 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00855 - - gmx:100777292 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00855 9 6437119 6439825 Phac9g00855 9 6437119 6439825 ECH