Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02075 ATGACAAATCAACATCCCACTTTGCATTGTAGTTTCCTTTTGTTTCTCTTGTACCTTCTACTCAATGCAGCTCCTACGAGTTGCAAGTTCACTATTGAGCCATGTTCTGACAATAACTCGTGCAATGCGCTTCTTGGCTACACCCTTTACACTGATCTCAAGGTCTCTGAGGTTGCTTCTCTCTTCCAAATAGACCCTATTGGACTTCTCACTGCCAATGCCATTGACATCTCGTACTCTGATGTAGAGCATCGCATTCTCCCTTCCAAACTCTTCCTCAAGGTCCCTATCACATGTTCCTGTGCTGATGGGATTAGAAAATCAGCGTCTGCCCATTACAGGACTCGTCCTTCTGATACTCTCTCTTCCATTGCAGATTCAGTGTATGGAGGTCTGGTATCCCCTGATCAGCTTAGGGAGGCTAATTCCATAGCTGACCCTTCGGTGCTTGATGTGGGTCAGAACCTTGTGGTGCCACTTCCATGCACTTGCTTCAATGGCAGTGATAATTCTTTGCCTTCAATTTACCTCTCCTATGTGGTAAAGCCAATTGATACGTTGGCTGCCATTGCAGCTAGATATTTCACTACACTTACTGATTTGATGAATGTTAATGACATGGGGAGTGCAGCTATCTCTGATGGAGATATTCTTGCTGTTCCAATTCCTGCTTGTGCATCAAATTTTCCAAAATATGCCACTGATTTTGGCATGCTTGTCCCTAATGGAAGCTATACCATTGCAGCTAGTCACTGTGTGCAGTGTAGCTGTGGACCACAAAATTTAGATTTATACTGTATTCCCTCTTCTCTAGCTGTCTCTTGCTCCAGCATGCAATGCAAAAGAAGCAATCTTATACTTGGGAATGTTACCGTGCAACATATGAGCTCAGGATGCAATGTGACATCGTGCAATTATGATGGTTTTGTCAATGGCAACATATTAACAATGATGTCCTCATCTCTTGAGCCTCATTGTCCAGGTTAG 987 0.4357 MTNQHPTLHCSFLLFLLYLLLNAAPTSCKFTIEPCSDNNSCNALLGYTLYTDLKVSEVASLFQIDPIGLLTANAIDISYSDVEHRILPSKLFLKVPITCSCADGIRKSASAHYRTRPSDTLSSIADSVYGGLVSPDQLREANSIADPSVLDVGQNLVVPLPCTCFNGSDNSLPSIYLSYVVKPIDTLAAIAARYFTTLTDLMNVNDMGSAAISDGDILAVPIPACASNFPKYATDFGMLVPNGSYTIAASHCVQCSCGPQNLDLYCIPSSLAVSCSSMQCKRSNLILGNVTVQHMSSGCNVTSCNYDGFVNGNILTMMSSSLEPHCPG* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02075 328 Gene3D LysM domain 107 167 IPR036779 -
Phac8g02075 328 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Phac8g02075 328 CDD LysM 178 220 IPR018392 -
Phac8g02075 328 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 10 328 - -
Phac8g02075 328 SMART LysM_2 112 159 IPR018392 -
Phac8g02075 328 SMART LysM_2 178 221 IPR018392 -
Phac8g02075 328 Gene3D LysM domain 168 229 IPR036779 -
Phac8g02075 328 SUPERFAMILY LysM domain 112 160 IPR036779 -
Phac8g02075 328 CDD LysM 112 158 IPR018392 -
Phac8g02075 328 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Phac8g02075 328 Pfam LysM domain 179 221 IPR018392 -
Phac8g02075 328 Pfam LysM domain 113 159 IPR018392 -
Phac8g02075 328 SUPERFAMILY LysM domain 177 222 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02075 Phac-Chr8 27584917 27587874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02075 12 328 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.219 9.49e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02075 - - pvu:PHAVU_008G163700g 640.958