Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02025 ATGGAGCTTGTGAATGACCAACAACAGCAGCAAAAACATTTTCATGTGTTGGTGGTTGATGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTTCTAAGAGATTCTTCCTGCAAAGCCACCTTCTTGGATTCTGGAGACAAGGCTTTGAAATATCTTGGCCTGCTAGATGATGAACTTGAAAATCTTTCCTCAACTTCTTCAGAGTCATTGCAGGAAAACGGAATGAAAGTGAACATGATCATGACAGACTACTGCATGCCAGGAATGAGTGGCTATGATTTACTGAAACGAATCAAGCTGCAGGGATCTTCTTGGAAAGATGTACCAGTCGTCATAATGTCATCAGAAAACGTACCATCTAGAATCACCATGTGCTTAGAAGGAGGGGCAGAGGAGTTTCTTCTGAAGCCTCTTCAGCCATCAGATTTAAAGAAGCTTCAACCATGCTTTTTAAAATCCTTTGACAATTCTAGTGAAGAAGATAGCCTCTTCAACAAAAGAAATCTGTATCCACAGCATGGTTTTAAATTGCAGTTTCTAACTACAATTGTAACTACAATGTTGAGATTTTGGAACTCTCTCTAA 588 0.398 MELVNDQQQQQKHFHVLVVDDSVIDRKLLERLLRDSSCKATFLDSGDKALKYLGLLDDELENLSSTSSESLQENGMKVNMIMTDYCMPGMSGYDLLKRIKLQGSSWKDVPVVIMSSENVPSRITMCLEGGAEEFLLKPLQPSDLKKLQPCFLKSFDNSSEEDSLFNKRNLYPQHGFKLQFLTTIVTTMLRFWNSL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02025 195 ProSiteProfiles Response regulatory domain profile. 15 152 IPR001789 GO:0000160
Phac8g02025 195 Gene3D - 2 150 - -
Phac8g02025 195 CDD REC_typeA_ARR 16 147 - -
Phac8g02025 195 Pfam Response regulator receiver domain 16 146 IPR001789 GO:0000160
Phac8g02025 195 SMART REC_2 14 148 IPR001789 GO:0000160
Phac8g02025 195 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 152 IPR045279 GO:0009736
Phac8g02025 195 SUPERFAMILY CheY-like 13 147 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02025 Phac-Chr8 26778278 26780942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02025 9 154 Response Regulator Gene Family AT2G41310 56.463 5.06e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac8g02025 Response_reg 3.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02025 K14492 - gmx:100790440 290.041