Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00183 ATGACGGCTGTTATTGGTGGTGGCGGCGGCTACCAAGGCTCAATCAGACCAGGATCGATGGCTGATAGGGCAAGGATGGCAAAGATACACCAACCTGATGCAGCACTCAAATGTCCACGATGTGAATCTGCCAACACCAAGTTTTGCTACTACAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGTCGGCGTTACTGGACCAGAGGTGGTGCACTCAGGAACGTGCCGGTTGGAGGTGGTTGCAGAAGGAACAAAAGAAGCAAAGGAAGTAACGGTAGATCGAAGTCTCCTATGAAACCCTCTGCAAGTGCTAATTCTTCTTCTAGTGGCTGCACCACTGATCATGTGATGATGGCAACACAAACTCAGTTTCCATTCTTGACCTCTTTACATCATTATAATAGTGACTACGTTTCTGGGGGCATTGGATCTCATTTTGGGGCGATCACAACACCTTTGGTGGGTAGAAATGACAGTGATGTTGAGTTTCAAATCGGCACTAGTTCAGCTTCATCACTAGGTAACAGTGGTGGAGGTATGTTGTCAAATGGCCTTGGGGAGCAATGGAGGTTGAACAATCTGCAACAAGTTCAGCAGCAGTTTCCATTTCTGAGCACTAATTTGGAGCCACAGATTGGGTTGTTTCAGTTTGGTGGTGGAGAAAATAACAATGCTGAACCACCAAGTTATGCAAAAGATGGAGGGAGGTTTAGTATTCGTTCTAAACTAGATTCTATTTCTAGTCTAAGTGGGATCATGCCTCAGATTAACACGATAAAGCTTGAAGAAAGCCAAGGTTTGAGTTTGCCAAAAAATCTCTTGATGGGTAGTTCAGGAAATGATGTACTTTGGAACAATGGAAGTGGCAATGCATGGAGTGAGCTTCCTTCTTTCACTCCTTCACATAACCACTTGTTGTGA 933 0.4523 MTAVIGGGGGYQGSIRPGSMADRARMAKIHQPDAALKCPRCESANTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSNGRSKSPMKPSASANSSSSGCTTDHVMMATQTQFPFLTSLHHYNSDYVSGGIGSHFGAITTPLVGRNDSDVEFQIGTSSASSLGNSGGGMLSNGLGEQWRLNNLQQVQQQFPFLSTNLEPQIGLFQFGGGENNNAEPPSYAKDGGRFSIRSKLDSISSLSGIMPQINTIKLEESQGLSLPKNLLMGSSGNDVLWNNGSGNAWSELPSFTPSHNHLL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00183 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 186 IPR045174 GO:0003700|GO:0006355
Phac8g00183 310 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
Phac8g00183 310 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
Phac8g00183 310 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Phac8g00183 310 MobiDBLite consensus disorder prediction 97 115 - -
Phac8g00183 310 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00183 Phac-Chr8 1139040 1141740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00183 15 92 C2C2-Dof Transcription Factor Family AT2G37590 83.333 6.49e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac8g00183 zf-Dof 6.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00183 - - vun:114185583 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00183 8 1139040 1141740 Phac8g00183 8 1139040 1141740 ECH