Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00182 ATGGTCTTCCCGTCCCTTCCAATCTACCTAGATCCACCCAACTGGTCACAACAGCAACCTAATCAGCCAGCAGGAATTGGCATCCGGACTCCACCATCACCTTTGCAGCCGCCACCTTCATCGATGACGGCTGTTATTGGTGGTGGCGGCGGCTACCAAGGCTCAATCAGACCAGGATCGATGGCTGATAGGGCAAGGATGGCAAAGATACACCAACCTGATGCAGCACTCAAATGTCCACGATGTGAATCTGCCAACACCAAGTTTTGCTACTACAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGTCGGCGTTACTGGACCAGAGGTGGTGCACTCAGGAACGTGCCGGTTGGAGGTGGTTGCAGAAGGAACAAAAGAAGCAAAGGAAGTAACGGTAGATCGAAGTCTCCTATGAAACCCTCTGCAAGTGCTAATTCTTCTTCTAGTGGCTGCACCACTGATCATGTGATGATGGCAACACAAACTCAGTTTCCATTCTTGACCTCTTTACATCATTATAATAGTGACTACGTTTCTGGGGGCATTGGATCTCATTTTGGGGCGATCACAACACCTTTGGTGGGTAGAAATGACAGTGATGTTGAGTTTCAAATCGGCACTAGTTCAGCTTCATCACTAGGTAACAGTGGTGGAGGTATGTTGTCAAATGGCCTTGGGGAGCAATGGAGGTTGAACAATCTGCAACAAGTTCAGCAGCAGTTTCCATTTCTGAGCACTAATTTGGAGCCACAGATTGGGTTGTTTCAGTTTGGTGGTGGAGAAAATAACAATGCTGAACCACCAAGTTATGCAAAAGATGGAGGGAGGTTTAGTATTCGTTCTAAACTAGATTCTATTTCTAGTCTAAGTGGGATCATGCCTCAGATTAACACGATAAAGCTTGAAGAAAGCCAAGGTTTGAGTTTGCCAAAAAATCTCTTGATGGGTAGTTCAGGAAATGATGTACTTTGGAACAATGGAAGTGGCAATGCATGGAGTGAGCTTCCTTCTTTCACTCCTTCACATAACCACTTGTTGTGA 1056 0.4631 MVFPSLPIYLDPPNWSQQQPNQPAGIGIRTPPSPLQPPPSSMTAVIGGGGGYQGSIRPGSMADRARMAKIHQPDAALKCPRCESANTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSNGRSKSPMKPSASANSSSSGCTTDHVMMATQTQFPFLTSLHHYNSDYVSGGIGSHFGAITTPLVGRNDSDVEFQIGTSSASSLGNSGGGMLSNGLGEQWRLNNLQQVQQQFPFLSTNLEPQIGLFQFGGGENNNAEPPSYAKDGGRFSIRSKLDSISSLSGIMPQINTIKLEESQGLSLPKNLLMGSSGNDVLWNNGSGNAWSELPSFTPSHNHLL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00182 351 Pfam Dof domain, zinc finger 75 131 IPR003851 GO:0003677|GO:0006355
Phac8g00182 351 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Phac8g00182 351 MobiDBLite consensus disorder prediction 12 41 - -
Phac8g00182 351 MobiDBLite consensus disorder prediction 121 156 - -
Phac8g00182 351 MobiDBLite consensus disorder prediction 12 26 - -
Phac8g00182 351 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 225 IPR045174 GO:0003700|GO:0006355
Phac8g00182 351 MobiDBLite consensus disorder prediction 138 156 - -
Phac8g00182 351 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00182 Phac-Chr8 1138784 1141740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00182 1 133 C2C2-Dof Transcription Factor Family AT2G37590 57.931 9.82e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac8g00182 zf-Dof 8.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00182 - - vun:114185583 525.783