Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01785 ATGGACACAGCTCAGTGGCCACAGGTTGCAGGTGCGGTGGAAAGGAAGCCAAGGCCACAGAAAGAACAATCTCTTAACTGTCCAAGGTGTCATTCCATCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCACACAGCCTCGCTATTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGATCTCTCAGAAACATCCCTGTAGGAGGTGGTTCCAGGAAGAACAAGAGATCTACTTTTTGTTCCACACCTCATAGCAATTCACCCGATAAGAAGCTTTCTGATCTGGTAATCACACCTCCATTGTCGCACTCTCAAAACCCTAAGAATAATATTATTCATCAAGGCCAAGATCTCAATCTGGCTTTCCCAGCCACCACCTCAGATTTCAGAAACATCTCTGAATTGGTTCAACAAAACAACAACAACAATAGTAGCAACAACATGTCGGCTTCGGCTTCTTCTCCATCTTCAACTACTACTACTACCACACCTACAACTTCTCACCTTTCTGCATTGGAGCTTCTTACTGGGATCACTTCAACTTCCACTGGCTTGAATTCTTTCATGCCTGTTCCCGTTCCAGCCGATCCAAATTCTGTCTACACTTGTGGATTTCCTCTGCAAAATTTCAAGCCAACCTTGAACTTCTCTTTAGATGGGATTGGACACGGGTACGCGAGCCTGCATAATGTTCAAAGTGGGAGGCTCTTGTTTCCATTTGAGGACTTAAAACAGGTTTCCACTGCTACCACAATGGATCAGAAGCAACAAGGAGATTCAACTGGGTATTGGACTGGAATGTTTGGCGGAGGATCATGGTAA 831 0.4489 MDTAQWPQVAGAVERKPRPQKEQSLNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSTFCSTPHSNSPDKKLSDLVITPPLSHSQNPKNNIIHQGQDLNLAFPATTSDFRNISELVQQNNNNNSSNNMSASASSPSSTTTTTTPTTSHLSALELLTGITSTSTGLNSFMPVPVPADPNSVYTCGFPLQNFKPTLNFSLDGIGHGYASLHNVQSGRLLFPFEDLKQVSTATTMDQKQQGDSTGYWTGMFGGGSW* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01785 276 Pfam Dof domain, zinc finger 23 79 IPR003851 GO:0003677|GO:0006355
Phac7g01785 276 MobiDBLite consensus disorder prediction 68 96 - -
Phac7g01785 276 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Phac7g01785 276 MobiDBLite consensus disorder prediction 77 96 - -
Phac7g01785 276 MobiDBLite consensus disorder prediction 141 170 - -
Phac7g01785 276 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 160 IPR045174 GO:0003700|GO:0006355
Phac7g01785 276 MobiDBLite consensus disorder prediction 1 25 - -
Phac7g01785 276 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01785 Phac-Chr7 15127833 15130158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01785 15 276 C2C2-Dof Transcription Factor Family AT3G61850 44.366 8.09e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac7g01785 zf-Dof 4.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01785 - - pvu:PHAVU_001G080800g 504.212