Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01783 ATGGACACAGCTCAGTGGCCACAGGAGATGGTGGTGAAACCAATAGAAGATATAGTAGTAGTGACAAATACATGTCCAAAGGTTGCAGGTGCGGTGGAAAGGAAGCCAAGGCCACAGAAAGAACAATCTCTTAACTGTCCAAGGTGTCATTCCATCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCACACAGCCTCGCTATTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGATCTCTCAGAAACATCCCTGTAGGAGGTGGTTCCAGGAAGAACAAGAGATCTACTTTTTGTTCCACACCTCATAGCAATTCACCCGATAAGAAGCTTTCTGATCTGGTAATCACACCTCCATTGTCGCACTCTCAAAACCCTAAGAATAATATTATTCATCAAGGCCAAGATCTCAATCTGGCTTTCCCAGCCACCACCTCAGATTTCAGAAACATCTCTGAATTGGTTCAACAAAACAACAACAACAATAGTAGCAACAACATGTCGGCTTCGGCTTCTTCTCCATCTTCAACTACTACTACTACCACACCTACAACTTCTCACCTTTCTGCATTGGAGCTTCTTACTGGGATCACTTCAACTTCCACTGGCTTGAATTCTTTCATGCCTGTTCCCGTTCCAGCCGATCCAAATTCTGTCTACACTTGTGGATTTCCTCTGCAAAATTTCAAGCCAACCTTGAACTTCTCTTTAGATGGGATTGGACACGGGTACGCGAGCCTGCATAATGTTCAAAGTGGGAGGCTCTTGTTTCCATTTGAGGACTTAAAACAGGTTTCCACTGCTACCACAATGGATCAGAAGCAACAAGGAGATTCAACTGGGTATTGGACTGGAATGTTTGGCGGAGGATCATGGTAA 888 0.4437 MDTAQWPQEMVVKPIEDIVVVTNTCPKVAGAVERKPRPQKEQSLNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSTFCSTPHSNSPDKKLSDLVITPPLSHSQNPKNNIIHQGQDLNLAFPATTSDFRNISELVQQNNNNNSSNNMSASASSPSSTTTTTTPTTSHLSALELLTGITSTSTGLNSFMPVPVPADPNSVYTCGFPLQNFKPTLNFSLDGIGHGYASLHNVQSGRLLFPFEDLKQVSTATTMDQKQQGDSTGYWTGMFGGGSW* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01783 295 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Phac7g01783 295 MobiDBLite consensus disorder prediction 86 115 - -
Phac7g01783 295 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Phac7g01783 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 179 IPR045174 GO:0003700|GO:0006355
Phac7g01783 295 MobiDBLite consensus disorder prediction 160 189 - -
Phac7g01783 295 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Phac7g01783 295 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01783 Phac-Chr7 15127833 15130158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01783 1 295 C2C2-Dof Transcription Factor Family AT4G24060 43.539 5.48e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac7g01783 zf-Dof 5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01783 - - pvu:PHAVU_001G080800g 553.518