Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01782 ATGGTTTGGGTAATTAACTTGTTTGTGCATGATATATTGAAGGAGATGGTGGTGAAACCAATAGAAGATATAGTAGTAGTGACAAATACATGTCCAAAGGTTGCAGGTGCGGTGGAAAGGAAGCCAAGGCCACAGAAAGAACAATCTCTTAACTGTCCAAGGTGTCATTCCATCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCACACAGCCTCGCTATTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGATCTCTCAGAAACATCCCTGTAGGAGGTGGTTCCAGGAAGAACAAGAGATCTACTTTTTGTTCCACACCTCATAGCAATTCACCCGATAAGAAGCTTTCTGATCTGGTAATCACACCTCCATTGTCGCACTCTCAAAACCCTAAGAATAATATTATTCATCAAGGCCAAGATCTCAATCTGGCTTTCCCAGCCACCACCTCAGATTTCAGAAACATCTCTGAATTGGTTCAACAAAACAACAACAACAATAGTAGCAACAACATGTCGGCTTCGGCTTCTTCTCCATCTTCAACTACTACTACTACCACACCTACAACTTCTCACCTTTCTGCATTGGAGCTTCTTACTGGGATCACTTCAACTTCCACTGGCTTGAATTCTTTCATGCCTGTTCCCGTTCCAGCCGATCCAAATTCTGTCTACACTTGTGGATTTCCTCTGCAAAATTTCAAGCCAACCTTGAACTTCTCTTTAGATGGGATTGGACACGGGTACGCGAGCCTGCATAATGTTCAAAGTGGGAGGCTCTTGTTTCCATTTGAGGACTTAAAACAGGTTTCCACTGCTACCACAATGGATCAGAAGCAACAAGGAGATTCAACTGGGTATTGGACTGGAATGTTTGGCGGAGGATCATGA 903 0.4341 MVWVINLFVHDILKEMVVKPIEDIVVVTNTCPKVAGAVERKPRPQKEQSLNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSTFCSTPHSNSPDKKLSDLVITPPLSHSQNPKNNIIHQGQDLNLAFPATTSDFRNISELVQQNNNNNSSNNMSASASSPSSTTTTTTPTTSHLSALELLTGITSTSTGLNSFMPVPVPADPNSVYTCGFPLQNFKPTLNFSLDGIGHGYASLHNVQSGRLLFPFEDLKQVSTATTMDQKQQGDSTGYWTGMFGGGS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01782 300 ProSitePatterns Zinc finger Dof-type signature. 52 88 IPR003851 GO:0003677|GO:0006355
Phac7g01782 300 ProSiteProfiles Zinc finger Dof-type profile. 50 104 IPR003851 GO:0003677|GO:0006355
Phac7g01782 300 MobiDBLite consensus disorder prediction 91 121 - -
Phac7g01782 300 Pfam Dof domain, zinc finger 48 104 IPR003851 GO:0003677|GO:0006355
Phac7g01782 300 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 185 IPR045174 GO:0003700|GO:0006355
Phac7g01782 300 MobiDBLite consensus disorder prediction 166 195 - -
Phac7g01782 300 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01782 Phac-Chr7 15127833 15130158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01782 18 300 C2C2-Dof Transcription Factor Family AT3G61850 40.361 5.83e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac7g01782 zf-Dof 5.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01782 - - pvu:PHAVU_001G080800g 535.413