Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00504 ATGCTCTCGGTTACGCAACCTTCGTGCATTCCCAAAACCCTAAAACCCTCCGTTCCTCTTCCGTTTCCGGCCATGAAGGACCGCCGAACGCCGTCCTCCTATGGCTCCGTTTACATTCCGCCGCACCACCGTTTGCGCTCCGTCGCCAATTTCAACAACTCACCCTCTCCGGTTCGCGCCAAACCCCACGAAAACCCTACACACATCATTACTACTCTGCAACCGCCGTCGACGGAGCCACTTCCCGATAAGGCACGTTCGCGCTTCGTTTCTGCTTATGACGACACCGTTTCGGAGGAAGGCTCCGATCGTGAATTCGAACCTCCCTCACTAGCGCGTGCTTCCAAATTTGCTTATCCGAATGCTTCGCTTAATGATAACACTGACGAATGGAAGCGGAAATTTACCATGCTCTTAAATGACAAGAGTAAGCAAGAGTTAATCTCGAGGGAGAAAAGGGATAGGCGTGATTTTGAGCGAATAGCAGTTGTTGCCAGCAGAATGGGGTTGTATAGCCATATGTATGCTAAGGTTGTTGTCTTCAGTAAGGTCCCACTTCCAAATTACAGATATGATTTGGACGATAGGAAGCCTCAGAGGGAGGTGAGCTTGTCTATCACCACATTTACCCGTGTTAAGGCACATTTTGAGGAATATCTTAGCCAAAAAGCCAGGATGAATAAAAGCTGTTTGGATTTGTCATCTGCAAGATCAGGGAGTAATGGCAGTATTGGTATGGATGAGGGGCTTTTTGAGCAACCTGAGCCACTAGCATCAAGTAAGGCTGTTATGGAGAAAATTGTTTGGCAGAGGAGCTTACAAATGCGTGATCAGCAGCAAGCTTGGCAGGAATCTGCTGAAGGAAGCAGAATGCTAGAATTTCGCAGAAGTCTCCCAGCTTATAAAAAGAAAGAAGAAATATTATCAGTCACATCAAGGAATCAGGTAGTTATCATTTCAGGCGAAACAGGTTGTGGCAAGACAACACAAATTCCACAATTTATTTTAGAATCTGAGATTGAATCAGTTCGTGGAGCTGCTTGTAATATCATATGCACACAGCCAAGACGCATTTCAGCCATGTCAGTTTCTGAAAGAGTGGCCTGTGAGAGGGGAGAGAAATTGGGCGAATCTGTTGGATATAAAGTTCGACTTGAGGGTATGAAAGGGAGAGATACCCATCTTCTCTTTTGCACCACAGGCATTTTATTAAGAAGATTACTAGCTGATAGAAAGTTAAAAGGCGTAACTCATGTTATTGTAGATGAAATTCATGAGCGTGGGATGAATGAAGATTTTCTGCTTATTATCCTTAAAGAACTCCTTCCCCGTCGACCAGAACTGAAACTAATTTTGATGAGTGCTAGCCTAGACGCAGAGCTCTTTTCTTCGTACTTTAATGGGGCTCCGACTATGTTTATTCCGGGCTTCACATACCCCGTTAAAACTCATTTTTTGGAGAACATTCTTGAAATGACGGGGTACAGATTAACTCCTTATAATCAAATTGATGATTATGGTCAAGAAAAGATGTGGAAAATGAACAGACAGGTCCCAAGAAAGAGGAAAAGTCAAATTGCTTCTGCTGTAGAGGATGCAATTAGAGTTGCTGATTTCAAAGATTACAGCTCACATACACAGGAGTCTTTGTCATGTTGGAATCCTGACTGTATTGGTTTTAGTCTCATAGAATATATTTTGTGCAATATATGTGAGAATGAAAGACCTGGTGCTGTTTTGGTTTTCATGACTGGATGGGATGATATAAGCTCTCTGAAAGAGAAGCTCCTGACACATACTGTCTTGGGAGATCCAAACCGTGTTCTGTTGCTTACATGTCATGGCTCAATGGCTAGCTCAGAGCAGAGATTAATATTTGAAGAACCTGAAGCTGGAGTAAGAAAAATAGTGCTTACAACAAATATTGCCGAAACCAGTATTACGATAAATGATGTTGTTTATGTTCTTGACTGCGGAAAAGCGAAAGAAACATCATATGATGCTCTGAATAACACACCTTGTCTGCTTCCTACATGGATTTCTAAGGTTTCTTCTCAACAAAGAAGAGGAAGAGCAGGTCGGGTACAACCAGGAGAGTGTTACCATCTCTATCCTAGATGTGTGTATGATGCATTTGCGGAATATCAATTACCAGAAATTTTGAGAACACCGTTGCAATCCCTCTGTTTACAAATTAAAAGTTTAAGACTTGGAAGTATATCCGAGTTCTTGTCCAGGGCTTTGCAATCTCCTGAGATACTTGCGGTACAAAATGCAATTGAATATTTAAAAATAATTGGAGCTTTGGATGAGGATGAGAATCTCACTATTCTAGGGCGCTATTTGACAATGCTTCCTATGGAACCCAAACTTGGCAAGATGCTAATATTAGGTGCTATTTTCAATTGCCTGGATCCCATATTAACTGTTGTTGCTGGGCTTAGCGTGAGAGATCCTTTTCTTACACCATTGGATAAAAAAGATCTTGCAGAGGCTGCAAAATCTCAATTCTGTGGTGCATATAGTGACCACCTTGCACTTGTAAGGGCACATGAAGGTTGGAAAGATGCTGAAATGGACCTGGGTGGATATGAATACTGCTGGAAAAATTTTCTTTCCTTGCAATCCATGAAAGCTATTGATGCTCTTCGGAGAGAGTTCATATGCCTACTCAAGGATACCGGATTAGTTGATAGCAACGCAGCCAGCTGCAATGCATGGAGCTCTGATGTAAATCTTATCCGAGCAGTTATTTGCTATGGTCTATATCCTGGAATTGGTTCAGTTGTGAATAATGAGAAATCATTCTCTTTGAAAACAATGGAGGATGGTCAAGTGCTCCTATATTCGAACTCAGTGAATGCTCGGGAGACTAAAATTCCATATCCATGGCTTGTTTTTAACGAGAAGATAAAAGTGAACTCCGTTTTTCTCCGTGACTCAACAGCTGTCTCTGATTCAATGGTGCTTCTGTTTGGTGGAAGCTTATTGAAGGGAGATGCTGATAATCACTTAAAAATGTTGGGAGGATATCTTGAGTTTTTTGTGGATCCCAGTGTTGTTGATTTGTACCAGAGTATAAGGAGAGAACTTGATGCCTTCATTCAGAACAAAGTAGCTACTTTTTCCAAGAATGGGCATACAGTGGTATCATGA 3156 0.4202 MLSVTQPSCIPKTLKPSVPLPFPAMKDRRTPSSYGSVYIPPHHRLRSVANFNNSPSPVRAKPHENPTHIITTLQPPSTEPLPDKARSRFVSAYDDTVSEEGSDREFEPPSLARASKFAYPNASLNDNTDEWKRKFTMLLNDKSKQELISREKRDRRDFERIAVVASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDRKPQREVSLSITTFTRVKAHFEEYLSQKARMNKSCLDLSSARSGSNGSIGMDEGLFEQPEPLASSKAVMEKIVWQRSLQMRDQQQAWQESAEGSRMLEFRRSLPAYKKKEEILSVTSRNQVVIISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRISAMSVSERVACERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHVIVDEIHERGMNEDFLLIILKELLPRRPELKLILMSASLDAELFSSYFNGAPTMFIPGFTYPVKTHFLENILEMTGYRLTPYNQIDDYGQEKMWKMNRQVPRKRKSQIASAVEDAIRVADFKDYSSHTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLTHTVLGDPNRVLLLTCHGSMASSEQRLIFEEPEAGVRKIVLTTNIAETSITINDVVYVLDCGKAKETSYDALNNTPCLLPTWISKVSSQQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDEDENLTILGRYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVRAHEGWKDAEMDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDTGLVDSNAASCNAWSSDVNLIRAVICYGLYPGIGSVVNNEKSFSLKTMEDGQVLLYSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSMVLLFGGSLLKGDADNHLKMLGGYLEFFVDPSVVDLYQSIRRELDAFIQNKVATFSKNGHTVVS* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00504 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 861 IPR027417 -
Phac7g00504 1051 Gene3D - 256 476 IPR027417 -
Phac7g00504 1051 SMART helicmild6 587 696 IPR001650 -
Phac7g00504 1051 CDD SF2_C_RHA 553 704 - -
Phac7g00504 1051 Pfam Helicase associated domain (HA2) 759 832 IPR007502 GO:0004386
Phac7g00504 1051 Pfam Helicase conserved C-terminal domain 564 695 IPR001650 -
Phac7g00504 1051 SMART ha2_5 758 848 IPR007502 GO:0004386
Phac7g00504 1051 Gene3D - 738 840 - -
Phac7g00504 1051 Gene3D - 561 715 IPR027417 -
Phac7g00504 1051 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 562 736 IPR001650 -
Phac7g00504 1051 SMART ultradead3 269 484 IPR014001 -
Phac7g00504 1051 FunFam DExH-box ATP-dependent RNA helicase DExH3 558 714 - -
Phac7g00504 1051 CDD DEXHc_RHA-like 314 474 - -
Phac7g00504 1051 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 914 995 IPR011709 -
Phac7g00504 1051 FunFam Putative ATP-dependent RNA helicase DHX36 738 842 - -
Phac7g00504 1051 PANTHER ATP-DEPENDENT RNA HELICASE 247 995 - -
Phac7g00504 1051 MobiDBLite consensus disorder prediction 57 82 - -
Phac7g00504 1051 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 475 IPR014001 -
Phac7g00504 1051 Pfam DEAD/DEAH box helicase 306 458 IPR011545 GO:0003676|GO:0005524
Phac7g00504 1051 FunFam DExH-box ATP-dependent RNA helicase DExH3 252 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00504 Phac-Chr7 2890826 2903856 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00504 7 2890826 2903856 Phac7g00504 7 2890826 2903856 ECH