Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00474 ATGGATTCAAACACATCAAGCTTTCTTTTGAACTCTTCAACTTTGCACTCAGTTTTCTACCAAGATAAACAAGATGACGGCATAATTGATCTGGGTCTCAGTCTCGGAACAGTTCAGCATGAAGCTTACCATTCTTCTAGCAACTTGTATGATGATGACCTTATGGACTGGCCTCAATCTAATCTGAACCTCAAGAACTCAAGCACAATGCATGGTAGACCTGTTCACGAAAATTTTGATGAAGAGATAGAGGGGGTGCAGAGCAATGAGAGATGGGCTTATGTGAAGGTTAACATGGATGGAGTTACCATTGGTAGGAAAATTTGTGTGCTTGATCACGGTGGATACTCAAGCTTAGCACTTCAATTAGAAGACATGTTTGGAAACCAATCCGTTTCTGGATTACGATTGTTCCAATCCAGATCAGACTACTCATTGTTCTACAAGGACAGACAAGATAATTGGAGACCTGTCGGTGATGTCCCTTGGAAGGAGTTTATAGAATGTGTGAAGAGGTTGAGGATTGCAAGAAAGAATGCAGCAGGCATTGTTTCTTGA 558 0.4122 MDSNTSSFLLNSSTLHSVFYQDKQDDGIIDLGLSLGTVQHEAYHSSSNLYDDDLMDWPQSNLNLKNSSTMHGRPVHENFDEEIEGVQSNERWAYVKVNMDGVTIGRKICVLDHGGYSSLALQLEDMFGNQSVSGLRLFQSRSDYSLFYKDRQDNWRPVGDVPWKEFIECVKRLRIARKNAAGIVS* 186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00474 185 ProSiteProfiles PB1 domain profile. 92 180 IPR000270 GO:0005515
Phac7g00474 185 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 48 180 IPR003311 GO:0005634|GO:0006355
Phac7g00474 185 Pfam AUX/IAA family 63 181 IPR033389 -
Phac7g00474 185 SUPERFAMILY CAD & PB1 domains 92 175 - -
Phac7g00474 185 Gene3D - 86 185 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac7g00474 Phac-Chr7 2703903 2706158 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00474 82 178 B3 DNA Binding Superfamily AT1G34310 34.021 6.98e-10 55.5
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Phac7g00474 AUX_IAA 8.2e-22 CL0072
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00474 7 2703903 2706158 Phac7g00474 7 2703903 2706158 ECH