Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g00474 | ATGGATTCAAACACATCAAGCTTTCTTTTGAACTCTTCAACTTTGCACTCAGTTTTCTACCAAGATAAACAAGATGACGGCATAATTGATCTGGGTCTCAGTCTCGGAACAGTTCAGCATGAAGCTTACCATTCTTCTAGCAACTTGTATGATGATGACCTTATGGACTGGCCTCAATCTAATCTGAACCTCAAGAACTCAAGCACAATGCATGGTAGACCTGTTCACGAAAATTTTGATGAAGAGATAGAGGGGGTGCAGAGCAATGAGAGATGGGCTTATGTGAAGGTTAACATGGATGGAGTTACCATTGGTAGGAAAATTTGTGTGCTTGATCACGGTGGATACTCAAGCTTAGCACTTCAATTAGAAGACATGTTTGGAAACCAATCCGTTTCTGGATTACGATTGTTCCAATCCAGATCAGACTACTCATTGTTCTACAAGGACAGACAAGATAATTGGAGACCTGTCGGTGATGTCCCTTGGAAGGAGTTTATAGAATGTGTGAAGAGGTTGAGGATTGCAAGAAAGAATGCAGCAGGCATTGTTTCTTGA | 558 | 0.4122 | MDSNTSSFLLNSSTLHSVFYQDKQDDGIIDLGLSLGTVQHEAYHSSSNLYDDDLMDWPQSNLNLKNSSTMHGRPVHENFDEEIEGVQSNERWAYVKVNMDGVTIGRKICVLDHGGYSSLALQLEDMFGNQSVSGLRLFQSRSDYSLFYKDRQDNWRPVGDVPWKEFIECVKRLRIARKNAAGIVS* | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g00474 | 185 | ProSiteProfiles | PB1 domain profile. | 92 | 180 | IPR000270 | GO:0005515 | |
Phac7g00474 | 185 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 48 | 180 | IPR003311 | GO:0005634|GO:0006355 | |
Phac7g00474 | 185 | Pfam | AUX/IAA family | 63 | 181 | IPR033389 | - | |
Phac7g00474 | 185 | SUPERFAMILY | CAD & PB1 domains | 92 | 175 | - | - | |
Phac7g00474 | 185 | Gene3D | - | 86 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g00474 | Phac-Chr7 | 2703903 | 2706158 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g00474 | 82 | 178 | B3 DNA Binding Superfamily | AT1G34310 | 34.021 | 6.98e-10 | 55.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX or IAA | Phac7g00474 | AUX_IAA | 8.2e-22 | CL0072 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac7g00474 | 7 | 2703903 | 2706158 | Phac7g00474 | 7 | 2703903 | 2706158 | ECH |