Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00427 ATGAGCCTTTCCATACTGCAACCCCAGCCGCAGCGCTGCCACTACCCTATAAGGCGGTGGCCCCGCATGGACTCCTCCTTCCACCGCCGCAAGGACAAGGTCGTCGTCATCATGGGCGCCACCGGCTCCGGCAAGTCCCGTCTCTCCATCGACCTCGCCACCCTCTTCCCCGTCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGCGGACTCGACATAACCACCAACAAGATCCCCCACGCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTCGACCCTTCCCTCCCGGAGTTCTCCCCCGCCGACTTCCGCCGCCGCGCCGGCCACCTCATCGAGGACATCACCCGCCGGGACTGCCTCCCCATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCGCTTCTCGTCCAGGATTTCCAGCCTGGCTCCAACGTCTTCCAGCAGGGCGAGGAGCTTATATCCTCGGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTGGACATAGCTTTCCCTGTGCTATCACAATACTTGTGCGACCGAGTCGACGACATGCTCGAATCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCTAAGGCTTCTCGTGAAACCGAGTCCGGTATCAGAAAAGCCATTGGGGTTCCGGAGTTCGACCGCTTTTTTAATAAGTACCCACCCTGGGCCGGCCCCGCGGGCCCGGGCCAGGATCCTCTGCGGCAGCGTGCGTACGAGGAAGCGGTGCGGGCGATCAAGGAGAACACGTGTGAGTTGGCCGAGCGTCAGATGGAGAAGATCGAACGGTTGAAGCGCGCCGGGTGGGACCTACGGAGGATCGACGCTACGGAAGCGTTTCGTATGGTGCTGACGTCAGGGTCCAACCATGGGTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 972 0.6111 MSLSILQPQPQRCHYPIRRWPRMDSSFHRRKDKVVVIMGATGSGKSRLSIDLATLFPVSEIINSDKMQVYRGLDITTNKIPHAQRRGVPHHLLGDVDPSLPEFSPADFRRRAGHLIEDITRRDCLPIVVGGSNSFVHALLVQDFQPGSNVFQQGEELISSELRYRCCFLWVDIAFPVLSQYLCDRVDDMLESGMVDELAQFFDPKASRETESGIRKAIGVPEFDRFFNKYPPWAGPAGPGQDPLRQRAYEEAVRAIKENTCELAERQMEKIERLKRAGWDLRRIDATEAFRMVLTSGSNHGSDVWERQVLEPSVKIVKRFLME* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00427 323 Pfam IPP transferase 158 269 - -
Phac7g00427 323 Pfam IPP transferase 68 144 - -
Phac7g00427 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 321 IPR039657 -
Phac7g00427 323 FunFam Adenylate isopentenyltransferase 175 281 - -
Phac7g00427 323 Gene3D - 31 321 IPR027417 -
Phac7g00427 323 Coils Coil 254 277 - -
Phac7g00427 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 205 IPR027417 -
Phac7g00427 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 175 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00427 Phac-Chr7 2328802 2330220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00427 163 321 C2H2 Transcription Factor Family AT2G27760 30.387 2.65e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00427 7 2328802 2330220 Phac7g00427 7 2328802 2330220 ECH