Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00412 ATGAGTACAGCTAAGAACGCCGCAATCGCTGTTGGGGGCAAAACGGCAAGAGCATGCGATAGCTGTATAACGAAACGGGCACGTTGGTACTGTGCTGCCGACGATGCTTTTCTCTGCCAAGCTTGTGACTCTTCGGTTCACTCCGCCAATCCCTTGGCTCGCAGACACGAACGAGTCCGCTTGAAAACGGCGTCGTACAAGTCCACCGACGAACAACAACAACAACAACCTCCCACGTGGCACACTAAGAAAGCTCGAACGCCCAGACACGGGAAACACTCTCGTAGCAACAACCCCTTCCATCTGGTGCCTGAAGTGGGGTCGGAAGAGGTGAACTCCAATGAAGAGAACGAGGAGCAGCTTCTTTATAGGGTTCCCATATTCGACCCTTTTCTTGCTGAGCTATGTGGAACTAATAGTTCTTCTCCTTCTTCGGTGACTTCAACTGATCAAGGAGTAGCAGCTGCTGTGGCCGAGGGTGAAAACAAAGGGGTGCAGAGCAATATTTTTTATCAAAGTAATAATGAGATGGAAAACTTGCATGGGATGCTTCCTTCGGATGCAGAACTTGCTGAGTTTGCTGCTGATGTTGAGAGTTTATTGGGTAGGGGGCTTGAAAACGAGTGCGTGGGGATGGAGGATTTGGGACTCATTGATGCGAAGGAGGAGGAGTGTTCGGAGGGTAGTGGGAAGGTGAAGGTGGAAGAAGAGAGCCCTGAGATGGAGATGGAGATGGAGATGGAGATGGTGGGAAGAGATGTATCATTTGAGTTGAGCTTTGATTATGAGACGTGTGAAGAGGTTAAGGAGAATGTTTGTGATTTGGAATTTGGCAAGGAGGAGGAGAAGGAAGAAGAAATGGTGAAAAAGAAGAAGATATCGTTGCAGCTTGATTACGAGTCCGTGATTATCGCCTGGGCTAGCCAAAAGTCTCCCTGGACCACTCCTCACAAACCAAACTTGGACCCCGACGAGTGCTGGCACCATTGCATGGAAAATTGTGGGACGGGAATGGATGATCCTTATGGTGAAGTGGGTGGATTTGGGATTCATCCAATGATAATTGACGGCGGCAGAGAAGCGAGAGTGTCAAGGTACAGAGAAAAGCGCAGAACAAGGTTGTTCTCCAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGACCCAGAATGAAGGGGAGGTTTGTGAAGAGGGCTTCCTTTGCACCACCAACATTTCCTTTGCTAAATCACTAA 1245 0.4851 MSTAKNAAIAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASYKSTDEQQQQQPPTWHTKKARTPRHGKHSRSNNPFHLVPEVGSEEVNSNEENEEQLLYRVPIFDPFLAELCGTNSSSPSSVTSTDQGVAAAVAEGENKGVQSNIFYQSNNEMENLHGMLPSDAELAEFAADVESLLGRGLENECVGMEDLGLIDAKEEECSEGSGKVKVEEESPEMEMEMEMEMVGRDVSFELSFDYETCEEVKENVCDLEFGKEEEKEEEMVKKKKISLQLDYESVIIAWASQKSPWTTPHKPNLDPDECWHHCMENCGTGMDDPYGEVGGFGIHPMIIDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAPPTFPLLNH* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00412 414 ProSiteProfiles CCT domain profile. 359 401 IPR010402 GO:0005515
Phac7g00412 414 Pfam CCT motif 359 401 IPR010402 GO:0005515
Phac7g00412 414 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 403 - -
Phac7g00412 414 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Phac7g00412 414 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Phac7g00412 414 SMART bboxneu5 14 61 IPR000315 GO:0008270
Phac7g00412 414 MobiDBLite consensus disorder prediction 66 82 - -
Phac7g00412 414 CDD Bbox1_BBX-like 18 61 - -
Phac7g00412 414 MobiDBLite consensus disorder prediction 65 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00412 Phac-Chr7 2198270 2200362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00412 5 401 C2C2-CO-like Transcription Factor Family AT1G25440 47.529 4.63e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac7g00412 zf-B_box 8.5e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00412 7 2198270 2200362 Phac7g00412 7 2198270 2200362 ECH