Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02633 ATGGAGCAAGGAGGTGGAGAAGGAGGTGACATGAATAAACTACCTCAGGATTCAAGAATGAAGGAGATGCAGCAAGGGGAAGCACAGGCTCAGGTTCAGGCCCCTCAACAACCCCAAAAGTGTCCTCGATGCGACTCTCTTAACACCAAATTTTGCTATTACAACAACTATAGCTTGTCACAGCCTCGTTACTTTTGCAAAACATGCAGGAGGTACTGGACTCAAGGTGGAACCTTAAGGAACGTCCCCGTCGGTGGCGGTTGCCGCAAGGGGAAGCGCGCCAAGAATTCCAATCCATCATCATCGGATAATTCCTCTTCTCGCTCGCTTCCGCAACAACAACAACAATCACAAGACGTGGTGGTTCAAACCCAACCACCACCTTTAACAACGGCGGTGAGGGCTAAAGACCCTTCTTCAGTTTTGGCTTCACCTTTCTACCAAAGTGGTGGGTACTTGTCTTCTCTGGCTGCTATGCATTCGCTCAATCCATCATCACACCCTTTTGATCAGTCTCTGAATACTGACGCCTTGCGTTCTTCCAATCTGGGCCTTCTATCTGGTTTCAATGTTCAGCGGCCCACTGGGTCAATTGGGACAATTCGTCCGCCGCAATTGTATCAAAGGGAGGTGGTGTCTCTATATGATCAATCCACCATGGCTAATACCAATACCAATAGCAGTGGTGGTGTTTCTCACCATGATTGGCCTCATAGCTTCATCAATAATAATACTAATGCCAGCAATAGAGCCTCTGATGCCTCTTTGTGGAGCACCATCAGTACCACTATTGGTGGTAACTCCGAGAGGACTAGTGCTGCTGCTGCTACTACTGTTTCTGGGTCGTCTTTGGTCCAAAATCAATGGCCTGATATTCCAGGGTATGGCCCTCCGCCGTGA 900 0.4867 MEQGGGEGGDMNKLPQDSRMKEMQQGEAQAQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKNSNPSSSDNSSSRSLPQQQQQSQDVVVQTQPPPLTTAVRAKDPSSVLASPFYQSGGYLSSLAAMHSLNPSSHPFDQSLNTDALRSSNLGLLSGFNVQRPTGSIGTIRPPQLYQREVVSLYDQSTMANTNTNSSGGVSHHDWPHSFINNNTNASNRASDASLWSTISTTIGGNSERTSAAAATTVSGSSLVQNQWPDIPGYGPPP* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02633 299 MobiDBLite consensus disorder prediction 18 40 - -
Phac6g02633 299 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Phac6g02633 299 MobiDBLite consensus disorder prediction 94 122 - -
Phac6g02633 299 MobiDBLite consensus disorder prediction 273 289 - -
Phac6g02633 299 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Phac6g02633 299 MobiDBLite consensus disorder prediction 83 122 - -
Phac6g02633 299 MobiDBLite consensus disorder prediction 273 299 - -
Phac6g02633 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 226 IPR045174 GO:0003700|GO:0006355
Phac6g02633 299 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Phac6g02633 299 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02633 Phac-Chr6 24242000 24244084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02633 12 97 C2C2-Dof Transcription Factor Family AT5G60200 63.953 3.27e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac6g02633 zf-Dof 9.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02633 - - gmx:100817065 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02633 6 24242000 24244084 Phac6g02633 6 24242000 24244084 ECH