Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02632 ATGTCGGGTAACTGTGAGAAAATGGTAGTCATCCCTCCAACGACCAACCAATGGCCACAGGTGGATGATGAGAAGGTGTTGATGGGTTCGTTCGGTGGAAGTAAGAATAGTAAGGTAATGGAAAAAGCAGATCAAGAGGTTTTGCAGCAGCAGCTGCAACAACAAAGCCTCAAGTGCCCGCGTTGTGACTCATCAAACACTAAGTTCTGCTACTACAACAACTACAGTTTGTCTCAGCCTCGACACTTCTGCAAAGCCTGCAAGCGCTATTGGACAAGAGGTGGAACCCTCAGGAACGTTCCTGTTGGTGGGGGGTGCAGAAAAAACAAGCGTCTCAAGCGTCCAATAACAATCTCTTCTTCTGCTGCCATTGAAACTGCTTCTTCTTCTAATTCTTCTTCTGCTCTCACTGCTGCTTCGCAACCCCAGATCGACACTGCTTCAACCTCTTTGTTTTATGGGTTGCCGAGTAGCTCCACCGATGTGAATCTTCCACTCGTCCCTAGGTTTGGTTCCAGAATCTCCACTTCCAGGTTTGATCTTCAGCTGAATAATGCCCTTGGATTAGGTTTTTCATCCAATGAAGCTGGTGATAATAACAGTTTTAGAAACGGGTTTGGTTCAAATAACGCGCTTCTTTCAAGTTATAATTCCATCTTTGGTTCCTCTTCAAGTTCTACATCCACTACTCCAGCTATGTCTTCCCTGTTGAGCTCTACTTTTCTTCAACACAAGTTCATCGGTTGTGGTTTGAAAGATGGTGTTGATAGCAACACTTTCCAGCATGGCTTAGGCTTAACCCCACTAGAGCAGTTGCAAATGCCTAGTGATAACAGTGAGGCAGGGATGGTGGCTTTAAAAGATGTGAAAGTAGAATTAGGACAAAACAACAGGTTGGAGTGGAATGGTGCTTGTCAAAACCAGATCCAGCATGTGGGCATGTACGATCCTTCGCTTTATTGGAATAATTCAGCAACAGCTTTGGGTGTTTGGAACGATCAAGCTGCTAATATCGGTTCTTCAGTCACTTCTCTGATCTAG 1041 0.4496 MSGNCEKMVVIPPTTNQWPQVDDEKVLMGSFGGSKNSKVMEKADQEVLQQQLQQQSLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPITISSSAAIETASSSNSSSALTAASQPQIDTASTSLFYGLPSSSTDVNLPLVPRFGSRISTSRFDLQLNNALGLGFSSNEAGDNNSFRNGFGSNNALLSSYNSIFGSSSSSTSTTPAMSSLLSSTFLQHKFIGCGLKDGVDSNTFQHGLGLTPLEQLQMPSDNSEAGMVALKDVKVELGQNNRLEWNGACQNQIQHVGMYDPSLYWNNSATALGVWNDQAANIGSSVTSLI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02632 346 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Phac6g02632 346 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 45 224 IPR045174 GO:0003700|GO:0006355
Phac6g02632 346 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Phac6g02632 346 Pfam Dof domain, zinc finger 55 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02632 Phac-Chr6 24226045 24228189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02632 1 346 C2C2-Dof Transcription Factor Family AT1G28310 39.037 1.11e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac6g02632 zf-Dof 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02632 - - gmx:778098 481.485