Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02527 ATGGCTGAGGAATCTCAAGGGATTAAGCTGTTTGGTGCAATGATTAGACTGAACAGTGAGGAAGTAAAGAAAGGAGAAAAAGGAAGGGAATACAAGAGGGAGGAGAAGAGAACAGAGAAGATAATACCGTGCCCCAGATGCAAGAGCATGGAAACTAAATTCTGTTATTTCAATAACTACAACGTTAATCAGCCAAGGCATTTTTGTAAGAGCTGCCAGAGGTACTGGACTGCTGGTGGGGCCCTCCGAAACGTCGCCATCGGAGCCGGCCGTCGGAAGGGCAAGCCGTCGTGTCATGGTGGCGGTGAGTTCCCCGATGGCTCTGTCTATGAAAGTTCGGAAGATGAGAACAAGTTTGAGATGGAACATAGGTTGGTTTCGGAAGAGGGTCACACAGAATTCCGGCAAATTTTTCCGGCGGCCAAGCGGCGGAGGGCTCCATCAGGTGGGTGGTTATCCGTCTCATGCTCGTCTTATCTTATCTTATTTGTATTTTTTTCGGCGGCCAAGCGGCGGAAGATTCTTAATGTGTTCTCATAA 540 0.4833 MAEESQGIKLFGAMIRLNSEEVKKGEKGREYKREEKRTEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAIGAGRRKGKPSCHGGGEFPDGSVYESSEDENKFEMEHRLVSEEGHTEFRQIFPAAKRRRAPSGGWLSVSCSSYLILFVFFSAAKRRKILNVFS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02527 179 Pfam Dof domain, zinc finger 40 95 IPR003851 GO:0003677|GO:0006355
Phac6g02527 179 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Phac6g02527 179 PANTHER CYCLIC DOF FACTOR 2 26 97 IPR045174 GO:0003700|GO:0006355
Phac6g02527 179 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02527 Phac-Chr6 23573699 23575561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02527 2 150 C2C2-Dof Transcription Factor Family AT2G34140 50.000 1.41e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac6g02527 zf-Dof 5.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02527 - - gmx:100820604 207.608