Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01641 ATGGAAGAAATAGGTCCCAATTCATGCGCACAGCCATCGTTAGAGAAGAAAGCAAGACCACAAGAGCAGTTGAATTGTCCAAGGTGCAGTTCAACCAACACAAAGTTCTGTTATTACAACAATTACAGCCTCACACAACCAAGATACTTCTGCAAGACTTGTAGAAGGTATTGGACAGAAGGTGGTTCTCTCAGAAACGTTCCCGTTGGAGGTGGCTCCAGGAAGAACAAGAAGGCCACCTCATCAAAGGTTCCTGACTTGAATCCACCAAGCCTCTCCTCAGTCTCGGCTATTTCTTCCCAAAACCCTAAAATGCAAGGAGTCCATGACCTTAATTTGGCTTTTCCTGCAGCTATGGACAAGTATCATGGCATGTCTCCATATGTTGAGATGCCAAAACTTGAAATTGGTGGTGAGAATAATACTGGCCACCACCATAGCCCTTCTTCTCTTTCACCACCGTATGGCATGGTGTCCAGGGGTTTGAATCCTTATGCTCCTAATCCCTTCATGACAAGCTCAGATTCACTTTACACACCCAACTATCCCATGCAAGAAATTAAACCAAACCTTAGCTTTTCAGTTGATGGGTTTGGAAATAGATCACATGGGGTTCAAGAGAACGGTGGTGGTGGGAGGCTTTTGTTCCCTTTCGGAGACATCAAGCACCTTTCTGTAGGTGTTGAAGTGGAACACAATAAAGAACAAGGAAATAATCCAACTGGATATTGGACTGGAATCATCGGTGAAGGGTCATCATGGTAA 765 0.4444 MEEIGPNSCAQPSLEKKARPQEQLNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKATSSKVPDLNPPSLSSVSAISSQNPKMQGVHDLNLAFPAAMDKYHGMSPYVEMPKLEIGGENNTGHHHSPSSLSPPYGMVSRGLNPYAPNPFMTSSDSLYTPNYPMQEIKPNLSFSVDGFGNRSHGVQENGGGGRLLFPFGDIKHLSVGVEVEHNKEQGNNPTGYWTGIIGEGSSW* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01641 254 MobiDBLite consensus disorder prediction 75 98 - -
Phac6g01641 254 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Phac6g01641 254 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Phac6g01641 254 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Phac6g01641 254 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 138 IPR045174 GO:0003700|GO:0006355
Phac6g01641 254 MobiDBLite consensus disorder prediction 65 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g01641 Phac-Chr6 17924849 17926932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g01641 16 254 C2C2-Dof Transcription Factor Family AT3G61850 48.000 1.87e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac6g01641 zf-Dof 4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01641 - - gmx:100775598 419.468