Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02199 ATGGATCCAAACACTGTCATGAGCGGCTACGACTTTGATGAGTGGGATCTCAACGGACACGACACCAACCTCGTCACTGATCCTTTTTCCTTTCAGTCCGATGTGGGCCCACCTGGGTTTTTTCCGAATACAATCCTAGACTCCGACCCGCTTGTTTCATCCTCCGCCGCTTCCGCCGCTGTGGTGGCTACGGTTGAGGAAGACACTGACTTTTCAGAAACCTTCAAGTTCATAAGTCAAATTCTCATGGAAGAGAACTTTGAACAGAAACCGTGCATGTGCTATGACCCTTTGACTCTGCAACACACCGAGAAATCCTTCTATGATGCTTTGGAATTGGAACCGCCACTGCCTCTTTCCCCGAATCAGCACCCGCTTGAGAGCCCCGATGGTAATTCTTCCAATTCCACTACTGATTCAGCCAATTCTCACGACTTTAAGCCTTCTTCACCCAATACACCTGTTTCTGGTGGTGGCGATGCTTTGCATTCCTCTACCCACGCGCCCTCTTTCTTTGTTCCTCCGTCTGCTTTGACTAAAATTAACGAGGGAACCCTGGATTTGGATTCTTCTGTGAGCAAGCTCTTGGCTGAAAATATTTTCAGCGACGCAGAATCTATGTTGCAGTTTAGGAGAGGGTTGGAGGAGGCTAGTAAGTTTCTTCCTCAGAGACCTCAGCTTTTCACTGGGTTCGAGAGCACCACGGTTTCTGCGGAACCAAAGGTAGGAGGGGACTTAACTGTGAAGCGGGAGAATTTAATTGGGGAGAAGAGTAGAAAGAATCACGCGCGCCAAGATGAAGAAGAAGGAAGAAGCAACAAACACTCCGAGGTTTGTGTTGATGAGGAGAATGAAATATCTGAAATATTTGATAAGGTGTTGCTTAGTGTTGAAAATGTTCCACTGTGTGCTGAGAATAATGTATCTGTGGCAGTGGGAGATAGTAACGCAAAGCTGAGAGATCAACCGCCTTCGGTTGATGGAGGGAAGGTTCGTTCCAAGAGGCAAGGGAAGAAGAAGGAAACAGTGGATTTGAGGACCCTTTTGGTTCTGTGTGCGCAAGCTGTGTCTGCCAGTAACAACAGGACTGCTAATGAACTATTGAAGCAGATTAGGCAGCATTCTTCTGCCTTGGGTGATGCCTCACAAAGGTTGGCTCATTATGTGGCCAATGCTTTGGAGGCTCGCTTGGTTGGTGCTGGAACTGGCACACAGATATTTTATATGAGCTACAAGAAATTCACTACTACTGATTACCTGAAAGCTTACCAAGTTTTCATATCTGCCTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAAATGATTATTAAAACAGCAGAAAAGGCAGAAACTCTTCATATTATTGACTTTGGTATCTTGTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAAGTAGAGTTGGAGGGCCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCCCAACCTGGCTTTCGCCCATCTGAAAGAATCGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAAGCGGTTCAATGTTCCCTTTGAGTACAAGGCCATACCATCTAGAAACTGGGAAACCATTCAAATCGAAGACCTTAAGATTCAGAGCAATGAGGTGCTTGCTGTGAACTGTCTGGTAAGGTTTAAGAATTTGCTTGATGAATCAATTGAAGTGAGCAGTCCCAAAAATGCTGTTCTGAATTTAATCAGGAAGATGAATCCGCATATTTTTGTTGACGCCGTGGTAAATGGATCTTATAATGCCCCTTTCTTTGTCACGCGCTTCAAGGAGGCACTGTTCCATTATTCTTCAATTTATGATATGTTTGATACTCTCATATCCCGTGAAAATGAATGGAGGTTGATGCTTGAGAGAGAATTTTTTGGTCGGGAGATCATGAATGTTGTAGCATGTGAAGCTCTTGAGAGGGTTGAGAGGCCAGAAACATACAAACAATGGCAGGTTAGGAATACTAGAGCTGGTTTTAGGCAGCTCCCACTGGACAAGGAGTTAATGGCCAAATTCAGAGGCAAGTTAAGGGAATGGTACCACAAGGATTTTGTCTTTGATGAAGATGGCGGCTGGATGCTTCAAGGTTGGAAGGGTCGCATTTTGTATGCTTCAACTTGTTGGGTGCCAGCATAA 2163 0.4489 MDPNTVMSGYDFDEWDLNGHDTNLVTDPFSFQSDVGPPGFFPNTILDSDPLVSSSAASAAVVATVEEDTDFSETFKFISQILMEENFEQKPCMCYDPLTLQHTEKSFYDALELEPPLPLSPNQHPLESPDGNSSNSTTDSANSHDFKPSSPNTPVSGGGDALHSSTHAPSFFVPPSALTKINEGTLDLDSSVSKLLAENIFSDAESMLQFRRGLEEASKFLPQRPQLFTGFESTTVSAEPKVGGDLTVKRENLIGEKSRKNHARQDEEEGRSNKHSEVCVDEENEISEIFDKVLLSVENVPLCAENNVSVAVGDSNAKLRDQPPSVDGGKVRSKRQGKKKETVDLRTLLVLCAQAVSASNNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGAGTGTQIFYMSYKKFTTTDYLKAYQVFISACPFKKFAHFFANKMIIKTAEKAETLHIIDFGILYGFQWPILIKFLSSRVGGPPKLRITGIEYPQPGFRPSERIEETGRRLAKYCKRFNVPFEYKAIPSRNWETIQIEDLKIQSNEVLAVNCLVRFKNLLDESIEVSSPKNAVLNLIRKMNPHIFVDAVVNGSYNAPFFVTRFKEALFHYSSIYDMFDTLISRENEWRLMLEREFFGREIMNVVACEALERVERPETYKQWQVRNTRAGFRQLPLDKELMAKFRGKLREWYHKDFVFDEDGGWMLQGWKGRILYASTCWVPA* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02199 720 MobiDBLite consensus disorder prediction 250 276 - -
Phac5g02199 720 MobiDBLite consensus disorder prediction 325 339 - -
Phac5g02199 720 MobiDBLite consensus disorder prediction 316 339 - -
Phac5g02199 720 MobiDBLite consensus disorder prediction 125 160 - -
Phac5g02199 720 MobiDBLite consensus disorder prediction 114 168 - -
Phac5g02199 720 ProSiteProfiles GRAS family profile. 336 718 IPR005202 -
Phac5g02199 720 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 273 713 IPR005202 -
Phac5g02199 720 Pfam GRAS domain family 345 717 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02199 Phac-Chr5 41308349 41311214 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02199 33 720 GRAS Transcription Factor Family AT1G07530 47.967 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac5g02199 GRAS 1.9e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02199 5 41308349 41311214 Phac5g02199 5 41308349 41311214 ECH
Phac5g02199 5 41308349 41311214 Phac11g00959 11 6191914 6195565 ECH
Phac5g02199 5 41308349 41311214 Phac11g00958 11 6186312 6192350 PCT
Phac11g00957 11 6186312 6192350 Phac5g02199 5 41308349 41311214 PCT