Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02198 ATGGATAGAAGAGTCTCCTCCACAATCAATATTGCTAATGATGAGGGTGATGTCTCTGCTGTCCTTGACTACATAAAGCAAATGCTGATGGAAGAGGACACAGAAGAAAAGTACAGTATGTTCCATGATTCCTTGGCTCTTCAATATACAGAGAGATCATTTTATCAGGTTATCACTCACCACAACCCTTCTTCCTCCTCCTCTTCTCCCTGTTCTTCCACACACCATCATGCTCACAGTTGCACCAGTTCCAGTGTGGAGAGTTCTGAGCAAAATGTCTCTGGTAGCTCCAGTGATAATAGTTCTGGTAACACTGATATCTCTGCTGAGTCTCAGTGGAGAAGCGTTGACCACAACACCCCGGCACTGCCAAACACTTTTACCTTTCCAGATAACTTTGTTTTCCCCTCAAATTCAACCTCCACCACTCAATCTTCCATGAATACTGTATTTGGATTCTTAGATAATTCCCTTCTTGATTCTGCGTTTCAAGAGAATTTCAAGAGAGGTCTAGAGCAAGGTACCAGGTTCCTTCCTAAACATAGTCCATTCATTGTTGACACGGACAACACGGCCTTTTCCCCTTCTTTCACAATGGTTCCAACTGTTGTAGTTAAGACAGAACCAGAAGAAAGTGTTGAAGGGGAGCATTTTCTGTCAGTGTCAAGAAGGAGAAATCGGGATCAGGAAGAGTATGAAGCAGATGGGAGAATCACGAAGACTTCAGCAGCATACGTGGATGAGAGTGAGCTATCTGAGTTGCTTGATAAAGTGGTGCTAGGCACTGGATTAGGAAAAGGGGTTCCTCCTGACACAGCCCTTTACCAAAACGATGAAACATTATTAACAAACATGTTTGGTGGGGAGGTCAGGAAAAGTGGCGAGGAAGTTGTGGATCTGAGGGCACTATTGATACATTGTGCACAAGCTGTTGCTTCTGATAGCCCTTCGTTTGCAAAGCAACTAGTAAAGCAGATTAAGCAGCATTCTTCTCCAACAGGGGATACTACTCAAAGGCTTGCACATTACTTTGGAAATGCCCTTGAAGCATGCTTGGATGGAACCGGTTTCCACGTTTATAGTGTTTTATCCTCCAAAAGAATCTCTGCCAAAGACATGATAAAAGCTTACCATGTATATGTTTCAGTGTGCCCGTTTGAAAAGATTGCAGTCATGTTTGCCAACAAATCAATTTATAGTCTTGCTGAGAATGCAGAAACAATTCATATCATAGACTTTGGTATCCGCTATGGCTTCAAGTGGCCTTCACTTATCAGCGAAATATCAAGACGTCCTGGTGGACCACCCAAGCTACGCTTCACGGGGATAGATCAGCCACAGCCAGGTTTCAGGCCAGAGGAGAGGGTGCTGGAGACGGGGCGTAGACTTGAAAATTATTGCAAGCGTTTCAATGTTCCATTTGAGTTCAATGCTATTGCAAGAAAATGGGACACTATCAGAATTGAGGACCTCAAGATAGAGAAAAACGAATTTGTAGCTGTGAACTGCATGTTTCAGTTGGAGCGTCTACTTGACGAGTCTGTGGTGTTGGACAATCCAAGGGATGGTGTTTTGAGGTTGATTAAGAAGGCAAATCCTGACATATTTGTGCACAGCATTGTGAACGGCTCCCATGATGTTCCATTCTTTGTGTCACGGTTCAGAGAGGCTTTCTTTCACTACTCTGCAGTGTTTGATATGCTTGACAGCAACCTTGATCGTGAAGATCCCAGCAGGTTGATGTTTGAGAAGGAGTTGTTTGGACAGGAGATCATGAACATCATAGCTTGTGAAGGTTGTGAGAGGGTTGAGAGGCCACAAACATACAAGCAATGGCAGCTTCATAACATGAGAATTGGGTTTCGGTTACTTCCTTTGAATCAAAAAGTCATTGACAAATTAAAGAAAAGGTTGAGAGATGATGCACACAACACGAATTTCATGCTTGAGGTGGATGGTGATTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTACATGCTTCTTCTTGTTGGATTCCTGCATAG 2025 0.4346 MDRRVSSTINIANDEGDVSAVLDYIKQMLMEEDTEEKYSMFHDSLALQYTERSFYQVITHHNPSSSSSSPCSSTHHHAHSCTSSSVESSEQNVSGSSSDNSSGNTDISAESQWRSVDHNTPALPNTFTFPDNFVFPSNSTSTTQSSMNTVFGFLDNSLLDSAFQENFKRGLEQGTRFLPKHSPFIVDTDNTAFSPSFTMVPTVVVKTEPEESVEGEHFLSVSRRRNRDQEEYEADGRITKTSAAYVDESELSELLDKVVLGTGLGKGVPPDTALYQNDETLLTNMFGGEVRKSGEEVVDLRALLIHCAQAVASDSPSFAKQLVKQIKQHSSPTGDTTQRLAHYFGNALEACLDGTGFHVYSVLSSKRISAKDMIKAYHVYVSVCPFEKIAVMFANKSIYSLAENAETIHIIDFGIRYGFKWPSLISEISRRPGGPPKLRFTGIDQPQPGFRPEERVLETGRRLENYCKRFNVPFEFNAIARKWDTIRIEDLKIEKNEFVAVNCMFQLERLLDESVVLDNPRDGVLRLIKKANPDIFVHSIVNGSHDVPFFVSRFREAFFHYSAVFDMLDSNLDREDPSRLMFEKELFGQEIMNIIACEGCERVERPQTYKQWQLHNMRIGFRLLPLNQKVIDKLKKRLRDDAHNTNFMLEVDGDWVLQGWKGRILHASSCWIPA* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02198 674 ProSiteProfiles GRAS family profile. 291 672 IPR005202 -
Phac5g02198 674 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 192 662 IPR005202 -
Phac5g02198 674 MobiDBLite consensus disorder prediction 65 111 - -
Phac5g02198 674 MobiDBLite consensus disorder prediction 215 234 - -
Phac5g02198 674 Pfam GRAS domain family 300 671 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02198 Phac-Chr5 41296052 41298580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02198 21 674 GRAS Transcription Factor Family AT1G07530 46.763 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac5g02198 GRAS 1.7e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02198 5 41296052 41298580 Phac5g02198 5 41296052 41298580 ECH
Phac5g02198 5 41296052 41298580 Phac11g00959 11 6191914 6195565 PCT
Phac11g00958 11 6186312 6192350 Phac5g02198 5 41296052 41298580 PCT