Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02174 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCAACAACAAAATCAACATCAAGCAAATGGCAGCAACACTCCTCAGCAGCTGCTTCATCCGATGCCTCAACAGCCGCAGGACCCTCACGCGGGAGTGCATGAAGCTGCAGGCCCAATCCGGCCCGGTTTGATGGCGGATCGGTCTAAGATTCCGGCCCAGGAAGGAGCTCTGAAGTGTCCTCGCTGTGAATCCACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCGCGCCACTTTTGCAAGACTTGTAGGCGCTATTGGACAAGAGGTGGTGCTCTCAGGAACGTTCCTGTTGGTGGAGGATGCCGCAGGAACAAGAAGAACAAAAGGAGTCGCTCCAAATCCCCGGTTTCTACTGAGAAATCATCACTTCCCAATTCCACAAGTGCGATGCCTGAGCTTATTGGTCGTTTCCCAACCCCTTTCATGGCCTCTCTTCAGAGTATGAACCGCTATGGTGTAGGGAACGCCGGTGTTAACTTGCGTGAGATGCAAGCACAGAACGGTTCTCATATGGGGTTTCAAATTGGTGGTCAGGGTCATGCTTCAACTGTTAATACTACTGCTGGAGGAGGTGTGGAACAGTGGCGGTTTCAGCAATTTCCTTTCTTGAATGGTTTTGACTCGGCTTCTGCTGTTTCTTCCTACCCTTTTCAAACTGAAACTGTTGAAGCTTTGGTTGGAGATATTGCCGCAACTTCTAGGGTTACTCAGCTACCACCACGGGTTAAATTGGAATACAACGGTGGTTTTAATTTGTCAAGATCTCCTTTGAGTGTCTCAGAAAATAGTAACCATTACTACTCATGGACGGATTTATCTGGTCTTGCATCTTCTTCCGCTAGTCATCTCTTGTAA 918 0.4804 MVFSSIPVYLDPPNWQQQQNQHQANGSNTPQQLLHPMPQQPQDPHAGVHEAAGPIRPGLMADRSKIPAQEGALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPVSTEKSSLPNSTSAMPELIGRFPTPFMASLQSMNRYGVGNAGVNLREMQAQNGSHMGFQIGGQGHASTVNTTAGGGVEQWRFQQFPFLNGFDSASAVSSYPFQTETVEALVGDIAATSRVTQLPPRVKLEYNGGFNLSRSPLSVSENSNHYYSWTDLSGLASSSASHLL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02174 305 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Phac5g02174 305 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 203 IPR045174 GO:0003700|GO:0006355
Phac5g02174 305 MobiDBLite consensus disorder prediction 117 152 - -
Phac5g02174 305 MobiDBLite consensus disorder prediction 12 53 - -
Phac5g02174 305 Pfam Dof domain, zinc finger 72 127 IPR003851 GO:0003677|GO:0006355
Phac5g02174 305 MobiDBLite consensus disorder prediction 12 38 - -
Phac5g02174 305 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02174 Phac-Chr5 41104767 41106875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02174 8 224 C2C2-Dof Transcription Factor Family AT3G55370 41.870 1.27e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac5g02174 zf-Dof 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02174 - - gmx:100775899 463.381