Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02075 ATGGATCCTTCTAGTGGACAACCCCAGCAAATATCTAGCCAGTCAGTGGAGAAGAAACCAAGGCCTAATCCAGAACAAGCTCTGAAATGCCCAAGATGCGACTCCACCAGCACAAAATTTTGCTACTACAACAATTATAGTCTTTCTCAGCCAAGATATTTCTGTAAGTCTTGTAGGAGATATTGGACCAAAGGAGGAACACTCAGGAATGTTCCAGTGGGAGGAGGATGCCGAAAGAAGAGATCACCATCATCATCATCATTAAAGAGGGATCATGATCAGACCTTCACACCCAATCTTAATCCACTCACTACATTTCCTCAGTTGTCTTATGGCTCCAATGACTTTGCTCTAGCATTAGCTAGGCTTCAAAAGCAATCAAGTGGGCAATTGGGTTACAATGACCATGAAATTTCTGCTTTGAGGAACCCCACAGGCTCCTTTTGTGACATTCTTAGCAATTCAGGCATGAATCCCTCCTCAGAAAATCCTTCATTTTTGGATGCAATTCGAACTGGGTTCCTTGAAACACAAAATCATCTTCAGAATTTGTATTACATGTATGGAAATGGGGACATGGGGGAGGTGGATAATGGCAATTCTGGTGGAGTTGGGGTCAGTGGAGAGATGATGCTCCCTTATAATCAAGTGATGAGCAATGCAGCCACTCAATCAATGAGTGAGTTGATGAGGCAAGAACAGTGTGGTGGCAGTGAACAAAGTGAAAGGAAGTTGTTGGGGGGTTCGCCATGGCAGCTTAATGCAGACACAAACATTGGTGAAATTGATTCAGGAAGAGCAATTGCAAGTTGGAACAGTTTCACATCTTCTTGGCATGGACTTCTCCATAGCCCCCTAATGTAG 864 0.4363 MDPSSGQPQQISSQSVEKKPRPNPEQALKCPRCDSTSTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKKRSPSSSSLKRDHDQTFTPNLNPLTTFPQLSYGSNDFALALARLQKQSSGQLGYNDHEISALRNPTGSFCDILSNSGMNPSSENPSFLDAIRTGFLETQNHLQNLYYMYGNGDMGEVDNGNSGGVGVSGEMMLPYNQVMSNAATQSMSELMRQEQCGGSEQSERKLLGGSPWQLNADTNIGEIDSGRAIASWNSFTSSWHGLLHSPLM* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02075 287 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Phac5g02075 287 MobiDBLite consensus disorder prediction 1 20 - -
Phac5g02075 287 MobiDBLite consensus disorder prediction 1 29 - -
Phac5g02075 287 MobiDBLite consensus disorder prediction 73 101 - -
Phac5g02075 287 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Phac5g02075 287 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 192 IPR045174 GO:0003700|GO:0006355
Phac5g02075 287 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02075 Phac-Chr5 40458538 40461095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02075 26 287 C2C2-Dof Transcription Factor Family AT2G28510 39.781 4.47e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac5g02075 zf-Dof 7.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02075 - - gmx:778104 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02075 5 40458538 40461095 Phac5g02075 5 40458538 40461095 ECH
Phac5g02075 5 40458538 40461095 Phac11g01093 11 7333481 7336717 PCT