Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00393 ATGCAAAAGCAATGTGAAGGCGATAACTTCAAGGGAACCCTTCCTACTATAAATTGGAACAAATCTTCATTCTCACATCACACACTACACATACTTTCATTGTTTGAGAGAGTAAGTAAGAGCAATACTCCAATGGCCACTCTTGTTCTTCATCATCAAACTTCTCCTGCTCAAGATGCTGAAGTTCTTCATCAAGCTTTCAAAGGATGGGGTTCTGATGGCAAGGCTATTATAGCAATACTGGGTCACAGAAATGTTCATCAGAGACAGGAGATCAGAAAGGCTTATGAAGAAATTTACCAAGAAAATCTCATCAAACGTCTTGAGTCTGAGATCTCTGGTGATTTTGAGAGAGCTGTGTATCGGTGGATGTTGGAACCTGCAGATCGTGATGCTGTTTTGATTAATGTAGCCATCAAGAATGGTCCTAAAGAGTACCATGTGATTGCAGAGATTTCCAGTGTTCTTTCAGCCAAAGAACTCTTGGCAGTGAGATCTGCTTATCATGATCGCTACAAACGTTCCATGGAAGAAGATGTAGCAGCTCACACCACTGGCCATCTTCGTCAGCTTTTGGTTGGGTTGGTGAGTTCATATAGGTATGAGGGTGATGAAATCAATGCAAAATTGGCACAAACTGAAGCTAATATTCTTCATGAATCAATTAAGGAGAAGAAAGCCAACCATGAAGAAGTTATCAGAATTCTTACCACCAGAAGCAAAAATCAACTTGTAGCAACCTTCAACCGCTACAGAGATGAGCATGGAATTTCCATCACTAAGAAATTGGTGGATCAGTCATCTGATGATTTTGTCAAGGTATTGCACACAGTGATTCGCTGCATCAATGACCCCAAGAAATACTATGAGAAGGTTTTGCGCAATGCAATGAAAAAATTTGGAACTGATGAGGATGGGTTGACTCGTGTGATTGTGACAAGGGCTGAGAAAGATTTGAAGGATATAAAGGAGATCTACTACAAAAGGAACAGTGTTCATCTTGAAGATGATGTCTCCAAGGAAATCTCAGGAGACTACAAGAGGTTCATCCTCACTCTGCTGGGGAACCAAGATTAG 1077 0.4076 MQKQCEGDNFKGTLPTINWNKSSFSHHTLHILSLFERVSKSNTPMATLVLHHQTSPAQDAEVLHQAFKGWGSDGKAIIAILGHRNVHQRQEIRKAYEEIYQENLIKRLESEISGDFERAVYRWMLEPADRDAVLINVAIKNGPKEYHVIAEISSVLSAKELLAVRSAYHDRYKRSMEEDVAAHTTGHLRQLLVGLVSSYRYEGDEINAKLAQTEANILHESIKEKKANHEEVIRILTTRSKNQLVATFNRYRDEHGISITKKLVDQSSDDFVKVLHTVIRCINDPKKYYEKVLRNAMKKFGTDEDGLTRVIVTRAEKDLKDIKEIYYKRNSVHLEDDVSKEISGDYKRFILTLLGNQD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00393 358 Pfam Annexin 131 195 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 Pfam Annexin 58 120 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 Pfam Annexin 291 353 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 Pfam Annexin 215 276 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 Gene3D Annexin 285 356 IPR037104 GO:0005509|GO:0005544
Phac5g00393 358 ProSitePatterns Annexin repeat signature. 301 353 IPR018252 GO:0005509|GO:0005544
Phac5g00393 358 PRINTS Plant annexin signature 162 176 IPR009118 -
Phac5g00393 358 PRINTS Plant annexin signature 269 287 IPR009118 -
Phac5g00393 358 PRINTS Plant annexin signature 204 224 IPR009118 -
Phac5g00393 358 FunFam Annexin 209 283 - -
Phac5g00393 358 SUPERFAMILY Annexin 47 358 IPR037104 GO:0005509|GO:0005544
Phac5g00393 358 FunFam Annexin 126 196 - -
Phac5g00393 358 Gene3D Annexin 209 283 IPR037104 GO:0005509|GO:0005544
Phac5g00393 358 FunFam Annexin 45 125 - -
Phac5g00393 358 Gene3D Annexin 126 197 IPR037104 GO:0005509|GO:0005544
Phac5g00393 358 Gene3D Annexin 43 125 IPR037104 GO:0005509|GO:0005544
Phac5g00393 358 ProSiteProfiles Annexin repeat profile. 54 125 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 ProSiteProfiles Annexin repeat profile. 209 280 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 PRINTS Annexin family signature 217 243 IPR001464 GO:0005509|GO:0005544
Phac5g00393 358 PRINTS Annexin family signature 341 354 IPR001464 GO:0005509|GO:0005544
Phac5g00393 358 PRINTS Annexin family signature 297 317 IPR001464 GO:0005509|GO:0005544
Phac5g00393 358 PRINTS Annexin family signature 68 90 IPR001464 GO:0005509|GO:0005544
Phac5g00393 358 PRINTS Annexin family signature 108 124 IPR001464 GO:0005509|GO:0005544
Phac5g00393 358 PANTHER ANNEXIN 45 353 - -
Phac5g00393 358 ProSiteProfiles Annexin repeat profile. 284 355 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 ProSiteProfiles Annexin repeat profile. 126 197 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 SMART annex3 71 123 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 SMART annex3 301 353 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 SMART annex3 142 195 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 SMART annex3 228 278 IPR018502 GO:0005509|GO:0005544
Phac5g00393 358 FunFam Annexin 284 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00393 Phac-Chr5 3199538 3203765 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g00393 5 3199538 3203765 Phac5g00393 5 3199538 3203765 ECH
Phac5g00393 5 3199538 3203765 Phac11g02736 11 38504314 38507242 PCT