Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02769 ATGCAGCAAATACACTCCATGGCACCAGGAACAGGGGGAGGAGGAGGAGGACCCAGGTTTTTCTCCGCCACCGCCACCGCCGACAGGAGGCTCCGACCCCACCACCAGAACCACCAGGCCCTCAAGTGCCCCCGCTGTGATTCTCTCAACACCAAGTTCTGTTACTACAACAACTACAACCTCTCCCAGCCTCGCCACTTCTGCAAAAACTGCCGCCGCTACTGGACCAAAGGGGGCGTCCTCCGCAACGTCCCGGTCGGCGGCGGCTGCCGCAAATCCAAACGCTCCAACAAACCCGCCAAAACCTCCGACACCGCCCCCCCTCCCCCGCTGCCCGACCCCGACCATTCAAGCAGCGAGAGCTCGAGCCTCACCGCCGCTGCCGCGGAGCCAGTATCGGCGCCGATAAACTCCGATTCCACGAACGTGCAAGAGTCGAAGTTGTTGGTCCCCGTGGATCCTGTTTTGGAAACGAATCCTCTGGAGCAAGGAGCAGGGGACTGCGGTGGTATCTTCTCTGAGATTGGACCTTTCACCAGCCTGATCGCTACTTCAACTAACGAGCCATTGGCTTTCGGTTTCGGCAACGCTCTGCCCGATGCGTCGTCGTTTCAGTGGCAGAACTCAAAGGTGACCAGCAACCAGGAATTGAAGTTGCCCGAAAGCTCCTTCCTCGATCACACCGTTGATTTGTCGACTATGAATGGTAAAACGAGCCACGGAACATTCGGATCGTTGGATTGGCAGGGCGGTGCGGATCAAGGTTTGTTTGATCTCCCTAACACCGTTGATCACGCTTACTGGAGTCACACTCACTGGTCTGACCACGACAATTCTTCTCTCTTTCATCTCCCCTGA 858 0.5734 MQQIHSMAPGTGGGGGGPRFFSATATADRRLRPHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKRSNKPAKTSDTAPPPPLPDPDHSSSESSSLTAAAAEPVSAPINSDSTNVQESKLLVPVDPVLETNPLEQGAGDCGGIFSEIGPFTSLIATSTNEPLAFGFGNALPDASSFQWQNSKVTSNQELKLPESSFLDHTVDLSTMNGKTSHGTFGSLDWQGGADQGLFDLPNTVDHAYWSHTHWSDHDNSSLFHLP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02769 285 MobiDBLite consensus disorder prediction 86 141 - -
Phac3g02769 285 MobiDBLite consensus disorder prediction 116 141 - -
Phac3g02769 285 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Phac3g02769 285 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 207 IPR045174 GO:0003700|GO:0006355
Phac3g02769 285 MobiDBLite consensus disorder prediction 1 22 - -
Phac3g02769 285 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Phac3g02769 285 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02769 Phac-Chr3 29935449 29939280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02769 28 282 C2C2-Dof Transcription Factor Family AT5G60850 44.637 8.93e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac3g02769 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02769 - - gmx:778097 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02769 3 29935449 29939280 Phac9g03401 9 33410376 33412019 PCT