Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04751 ATGAGAAACTCTCTGCAGTTTTTTTGGCCTCAGATCTTGTGTTTCATATTATTAACTTTTCAATATGAAGTTGAAACAAAATCCACCATTGAAGCATGCAATTCCTCAGACTCCTGCACCTCTCTCCTCTCTTATGTCTTGCCCTGGGACTCCAAAGTATCCCAAATCGCCACTCGTTTCCACGTAAACGTCTCTGATATCTTGGCCTCCAACTCTCTCTTCCCCATAACATCATCAAGTGCACACCAAATCCTGAGGGCCAAAACCTTGGTGAAAATACCCATCTTCTGCTCTTGTGTGGATGGCATCCGAAGGTCCATGTCAACCACTTACACTGTTCATGCAGCAGACACAGCTGCCTCCATATCAGAAGGCTATGGTGGGTTGGTTAGCATTCAACAAATCAACATTGTGAACAGCATCAATGCCACCAATCCCTTGACCAGTGGAGACACCCTTGTTATTCCACTTCCATGCACATGTTTCAACAACGTTAACAATGGGGGAACCGCTGTTTACATGTCGTATGTTGTGCAGAGTAGAGAGAGCCTGAGTAGCATAGCGTCAAAGTTTGGTACAACTTTTTCGGACTTGGAAACTGTAAATGGCTTTTGGGAAGCTACTGTAGATCCCGGAGACATTCTATCTGTTCCCATTGCAGCATGTTCATCAGCAACCTTGAAATGGTACGATGAGAGTATGATAGTCCCAAATGGCTCATACACATTAACTGCCAGCAACTGCATCAAATGCAGTTGCGAACCAATGGATATTACGATGCGATGTGTTCCTTCTGGACTAGATGTCCCCTGCTATAATTTACGTTGCAAACAATCCAATCTTATTATTGGCAATGAATGTGTGGAGCATTCAGAAACAGCTTGCAATGTCATCCAATGTGTTTACCGTGGCCACAGGGGTGGCAAAATTCTCAGTAGTATGAAGAACTCGTCTTACCTCCAGACCCCTGATAATCTGTGTCATAGTGGAGCATCATGTTGGCCTTTCTCATCATATCCTGAAGACCCGTTTGGTATGTCTCCAAAGTCATCTCCCTCCTTGCCACTGCCAGTTTCTAAAGCTTCTCTCAGTGCCTCCAATGGAAGGCTTCATCAATTTTTAATCAATGTGCTGCAAATATTCTTATTTCTAAAGTTTATCCTTGTTTTCCGAGTTCATCCTTGA 1185 0.4363 MRNSLQFFWPQILCFILLTFQYEVETKSTIEACNSSDSCTSLLSYVLPWDSKVSQIATRFHVNVSDILASNSLFPITSSSAHQILRAKTLVKIPIFCSCVDGIRRSMSTTYTVHAADTAASISEGYGGLVSIQQINIVNSINATNPLTSGDTLVIPLPCTCFNNVNNGGTAVYMSYVVQSRESLSSIASKFGTTFSDLETVNGFWEATVDPGDILSVPIAACSSATLKWYDESMIVPNGSYTLTASNCIKCSCEPMDITMRCVPSGLDVPCYNLRCKQSNLIIGNECVEHSETACNVIQCVYRGHRGGKILSSMKNSSYLQTPDNLCHSGASCWPFSSYPEDPFGMSPKSSPSLPLPVSKASLSASNGRLHQFLINVLQIFLFLKFILVFRVHP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04751 394 SMART LysM_2 175 218 IPR018392 -
Phac2g04751 394 SMART LysM_2 110 156 IPR018392 -
Phac2g04751 394 Gene3D LysM domain 165 226 IPR036779 -
Phac2g04751 394 ProSiteProfiles LysM domain profile. 109 155 IPR018392 -
Phac2g04751 394 Gene3D LysM domain 105 164 IPR036779 -
Phac2g04751 394 Pfam LysM domain 176 218 IPR018392 -
Phac2g04751 394 Pfam LysM domain 111 156 IPR018392 -
Phac2g04751 394 CDD LysM 175 217 IPR018392 -
Phac2g04751 394 SUPERFAMILY LysM domain 174 218 IPR036779 -
Phac2g04751 394 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 15 317 - -
Phac2g04751 394 ProSiteProfiles LysM domain profile. 174 217 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04751 Phac-Chr2 44422666 44426966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04751 10 317 LysM Receptor-like Protein (LYPs) Gene Family AT1G77630 43.087 5.06e-80 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04751 - - vra:106767878 669.077