Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03589 ATGGCCCAAGTAGAGAGTGGGCAAGCCAGTGAAGGGATTAAGCTGTTTGGAACAACGATTACCTTGCATGGTAGAGAAAGAAGAGAAGATAACAAAGTGAGTGAAGATGGGACAGAAAAGAGAGCAGAGAGGATCATACCGTGTCCAAGATGCAAGAGCATGGAAACCAAGTTTTGCTACTTCAACAACTACAACGTTAATCAGCCTAGGCATTTCTGCAAGGGCTGCCAGAGGTACTGGACTGCCGGCGGAGCCCTTCGCAACGTACCAATAGGGGCAGGCCGCCGAAAGGCCAAACCGCCGTCGCATGACCCTACAGCTTTTCTGGACGCATCCACGGTTCAACAACAATTTGCTTTGGATGAATGGGATGTTGCCACCATCACCCACGGAGATTTCCGGCACTTTTTTCCGTCGAAAAGGCGGAGGATAAACTCAGCTGAGCATGAAAGTCAAAACGAGTTTGTTATGAGCCACGAAATCATAGAACATCCGAATGAGATAGAAACGAAGGAGGCTTTAAAAGGCAGTGACAGTCTAAAGCTTATCTGA 552 0.4801 MAQVESGQASEGIKLFGTTITLHGRERREDNKVSEDGTEKRAERIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPSHDPTAFLDASTVQQQFALDEWDVATITHGDFRHFFPSKRRRINSAEHESQNEFVMSHEIIEHPNEIETKEALKGSDSLKLI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03589 183 PANTHER CYCLIC DOF FACTOR 2 31 121 IPR045174 GO:0003700|GO:0006355
Phac2g03589 183 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Phac2g03589 183 Pfam Dof domain, zinc finger 45 99 IPR003851 GO:0003677|GO:0006355
Phac2g03589 183 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03589 Phac-Chr2 36817604 36819913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03589 8 143 C2C2-Dof Transcription Factor Family AT1G29160 55.488 4.06e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac2g03589 zf-Dof 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03589 - - pvu:PHAVU_002G238400g 376.326