Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g03478 ATGGTAGTAGTCACCCCTCCAACAGCGTCTAACAAATGGACACAGTTATCTTCTCTTGCATCTCAGATAGATGATCGCAAGGCCTCTATGGGAAGAGTCATGGAAAAACCAACCCAAGATCTTCTTCAGCAGCAGCAACAAGCCCTCAAGTGCCCTCGCTGCGACTCTTCAAACACCAAGTTCTGCTACTACAACAACTACAGTTTGTCACAGCCTAGGCACTTCTGCAAAGCCTGCAAGCGATACTGGACTAGAGGTGGAACTCTCAGAAACGTTCCCGTTGGTGGTGGTTGCAGAAAAAACAAGCGTGTCAAACGTCCAAACGGTGACGCTTCTGCTAACTCCCCCCCTTCTTCCTCCACTCCTAGCTCCAATTCAAACCCTCCTTCACGGCCCCACATCCCTTCTAGTTCAACCGCAAACCATGTCAATGTAAACCCTTTGTTTTATGGGCTACCCAATAGTAACGGTTGTGATGTCATGGATGTTCCTTTCCCAAGGTTTAATCTTCAGTCTCAGCTGAATGCCCTTGGGTTAGGTTTTTCGTCCGGGGTTAACGTTATCTCAAGTGAACCTAGTGATAATGGGTTTAGTACTACTACTACTACTTCAAATACTAACAACTTTCTTTCGGCTTATAATTCCATATTTGGTTCTTCTTCCTCCTCAACTTGTGCACCCTCAACTCCTGTTATGGCTTCCTTGCTGAGTTCTACTCTCCTGCAGCAGAAGTTTATCGGTGGTGCTGGGGTGAAGGGTCATCATGATGGCAACGGTTTCCAGGGTTTTGCACCGCTACAAGGGTTGCAAATGGAAGGGAGTAATAATATTAGCTCAAAAGAAGTGAAAGCTGAAGGACCAAACAGGTTGGAGTTGGAGTGGAGTAATAATAACAATAGCAATGGTGGTGGTGGTGGTGGTGGTGGTTCTTGTCAAAACCAGATGGAGCATGTGGGCTTGTCTGATCCTAATTCGCTTTATTGGAACACTGCAACGGGTTTGAGTGCTTGGAGTGATCAACCTAACTTTGGTCCTTCAGTCACGTCTCTGATCTAG 1056 0.464 MVVVTPPTASNKWTQLSSLASQIDDRKASMGRVMEKPTQDLLQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPNGDASANSPPSSSTPSSNSNPPSRPHIPSSSTANHVNVNPLFYGLPNSNGCDVMDVPFPRFNLQSQLNALGLGFSSGVNVISSEPSDNGFSTTTTTSNTNNFLSAYNSIFGSSSSSTCAPSTPVMASLLSSTLLQQKFIGGAGVKGHHDGNGFQGFAPLQGLQMEGSNNISSKEVKAEGPNRLELEWSNNNNSNGGGGGGGGSCQNQMEHVGLSDPNSLYWNTATGLSAWSDQPNFGPSVTSLI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g03478 351 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Phac2g03478 351 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Phac2g03478 351 MobiDBLite consensus disorder prediction 93 139 - -
Phac2g03478 351 Pfam Dof domain, zinc finger 47 103 IPR003851 GO:0003677|GO:0006355
Phac2g03478 351 MobiDBLite consensus disorder prediction 292 315 - -
Phac2g03478 351 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 212 IPR045174 GO:0003700|GO:0006355
Phac2g03478 351 MobiDBLite consensus disorder prediction 111 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g03478 Phac-Chr2 36005608 36007098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g03478 49 152 C2C2-Dof Transcription Factor Family AT1G28310 69.524 1.04e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac2g03478 zf-Dof 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g03478 - - vum:124826825 568.926