Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02916 ATGGGCGCGGGGAAAGGGGCTGTTTGGATGGCCAAAGTTATGGCGCTGGTAGCAATCGCGGCGGTGGCGACTGTAGAGGCCCAACCGGAGGCAAAATTCGTGTGCAACAGCGCGAATAACTCCGCCTGTGGCGCCCTCATTGGGTACTCTCACGTGAACGGCACCACCCTGGGCGACATCCAAACCCTCTTCAACGTTAAGAAATTTGTGGACATTCTAGGCGCGAACAACCTCCCAAGCAACACCACAAAGCGCCACGAGGTGGGCCCCAGCGAGGTTGTGAAGGTGCCGTTGCCGTGCAGGTGCCTCAACGGGACGGGACTCTCGGACCGGGTTCCGCTTTATAAGATAAAAAAGGACGACACGCTGTACAACATAGCGACGACGACGTTTGGGGGTCTTGTGAAGTATCCGCAGATCACGGCGGCGAATAATATACCGGACGAGAATAATATCACCGCCGGGGCCACGATTTATATTCCGCTGCCGTGTAGCTGCGACACGGTGGATGGAAATAGAGTGGTGCACTATGCGCACCTGGTGGCGGCACAGAGCACGGTGGAGAGTATTGCTGAACAATTTGGCACCACTCAGCAGATCCTCCTCACACTCAATGGCATTTCCGACCCCAAAACGCTTCAGGCCGGTCAGATTCTTGATGTTCCTCTTCAAGCTTGTTCCTCGAGTGTGAAAAATGAATCATTGGATTATCCATTGCTTGTTGCAAATTCTACTTACGCCTATACTGCCAACGAATGCGTCAAATGCAAGTGTGACTCCAGCAACAACTACATATTACAATGCGAGCAATCCGAACTCAAACCTACCAACTGGTCTACTTGTCCTTCTGCGCAATGCTCAAGCAACGTCTTCATTGGCAACATCACTTCCCATACAGATACCTGCAATCGCACAATCTGTGCCTATACTGGTTATACATTCCGCAATATCTCAGCAGAACTTGTAACGCAGAACACTTGTGCAGTGCCACCGAGTCCTTCAGGAGGATCTAGTGGTTCTGGTTCAGGAGCGCCCAGGAGCACTTTGCAAGGCTTGCTTTGGAGTAACCTTTTCATTGTTATTCACTTTGTCCTCTTTCTTGTCTATGTTTTTTAG 1116 0.5116 MGAGKGAVWMAKVMALVAIAAVATVEAQPEAKFVCNSANNSACGALIGYSHVNGTTLGDIQTLFNVKKFVDILGANNLPSNTTKRHEVGPSEVVKVPLPCRCLNGTGLSDRVPLYKIKKDDTLYNIATTTFGGLVKYPQITAANNIPDENNITAGATIYIPLPCSCDTVDGNRVVHYAHLVAAQSTVESIAEQFGTTQQILLTLNGISDPKTLQAGQILDVPLQACSSSVKNESLDYPLLVANSTYAYTANECVKCKCDSSNNYILQCEQSELKPTNWSTCPSAQCSSNVFIGNITSHTDTCNRTICAYTGYTFRNISAELVTQNTCAVPPSPSGGSSGSGSGAPRSTLQGLLWSNLFIVIHFVLFLVYVF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02916 371 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 14 329 - -
Phac2g02916 371 Pfam LysM domain 186 222 IPR018392 -
Phac2g02916 371 Pfam LysM domain 115 161 IPR018392 -
Phac2g02916 371 SUPERFAMILY LysM domain 114 162 IPR036779 -
Phac2g02916 371 ProSiteProfiles LysM domain profile. 177 221 IPR018392 -
Phac2g02916 371 ProSiteProfiles LysM domain profile. 113 160 IPR018392 -
Phac2g02916 371 Gene3D LysM domain 169 235 IPR036779 -
Phac2g02916 371 SUPERFAMILY LysM domain 177 222 IPR036779 -
Phac2g02916 371 CDD LysM 179 221 IPR018392 -
Phac2g02916 371 SMART LysM_2 178 222 IPR018392 -
Phac2g02916 371 SMART LysM_2 114 161 IPR018392 -
Phac2g02916 371 Gene3D LysM domain 114 168 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02916 Phac-Chr2 30922569 30926387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02916 16 317 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 49.342 1.25e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02916 - - gmx:100804190 553.903