Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02664 ATGTCAGAGGTTAAAGGCTCTGAGATAAAGCTCTTTGGAAGGACAATCTCCCTGCCACACAATGATTCTTCTTCACCTGCATGTCTCGCTTGTCCTTCATCTTCCTCTTCTCCCCCGCAAGTTACCTCTGCAACACAACAACATCAAGAAGACCAGGAACCAATAAGGAAATCACTTACCTCACTTCAAGACGATGATGCGTCATCACATCAAACCACAGAGGATTTAAAATCTCCCGCTTCAGGCATACTCGATAATCCTAAGACTCCCTCAGCCGAAACAGAGACATCACTGCAGAAATCTTCTGCAAACGGAGAACAGAGCGAGACTACAAGTGCTTCTGAAGATAAAACACCAAAGAAACCTGACAAGATACTTCCATGTCCGCGGTGCAATAGCATGGACACCAAATTCTGCTACTACAACAACTACAACGTCAACCAGCCTCGTCATTTCTGCAAGAACTGTCAAAGATACTGGACTGCAGGAGGAACAATGAGGAATGTGCCGGTGGGTGCTGGTCGCAGAAAAAACAAGAACATTTCGGCTGCAGCTGCGTCACATTACCGACAGATAATGATCCCGGAGGCACTTCAAGGAGCTACACTCAATGCCTCCAATGGATTGCATAATGCCCTTTTGAGGAATAGAGCAGGTGTCTTCACTTTTGGTCCTGATACCCCTCTCTGTGATACCATGAGTTCTGTGTTGAGCATTGCTGAGCGAGCCCAAAGTTGTGTATCTAATGGGTTTCATGGAACTGAGCCAAATAGTTGTGTTTCCTATAGTAAGGAGGGTGGTCATTCTACTGGAGTTTCTGTTTCAACAACTTCAGCTTCCAGCCATACAAGCTCACATGAATCAGTTGATGAAAGAGTTGAAGGTTTCAGTCCTCAATTATCATACTTCCCAGGTGCCCCTTGGCCTTATCCTATGCCTCGTCATACAGTTTGCCCTCCTAGCTACCCTTTATCATTCTATACCACACCAGCATATTGGGGTTGTATGCCACCCTCTTGGAATATGCCCTGTATGTCACCCCAATCTTCTGTTACCAACTCTGTCTCTGCCCCCATTTTAGGGAAACACTCAAGGAATGGGAACATCATTACCCCATCCAATTCACAGAAAGAAATGCGTGGTGTAGAACATAGCACTTCAGAACACAATTTCTTGATTCCCAAGACTCTTAGAATTGATGACCCTGGTGAAACAGCAAGGAGTTCGATGTGGTCAAAACTAGGAACCAAGAATGACAGGGCCAGTTCTGGAGGCCTTTTCCAAGCTTTTCCACCCAAGGGAAATGACATGAATCGCATGGTTGAAGCATCACCCGAGTTGCAAGCCAACCCTGCAGCTCTATCGCGCTCTCTTACCTTCCATGAACAGACCTGA 1395 0.4602 MSEVKGSEIKLFGRTISLPHNDSSSPACLACPSSSSSPPQVTSATQQHQEDQEPIRKSLTSLQDDDASSHQTTEDLKSPASGILDNPKTPSAETETSLQKSSANGEQSETTSASEDKTPKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNISAAAASHYRQIMIPEALQGATLNASNGLHNALLRNRAGVFTFGPDTPLCDTMSSVLSIAERAQSCVSNGFHGTEPNSCVSYSKEGGHSTGVSVSTTSASSHTSSHESVDERVEGFSPQLSYFPGAPWPYPMPRHTVCPPSYPLSFYTTPAYWGCMPPSWNMPCMSPQSSVTNSVSAPILGKHSRNGNIITPSNSQKEMRGVEHSTSEHNFLIPKTLRIDDPGETARSSMWSKLGTKNDRASSGGLFQAFPPKGNDMNRMVEASPELQANPAALSRSLTFHEQT* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02664 464 Pfam Dof domain, zinc finger 123 180 IPR003851 GO:0003677|GO:0006355
Phac2g02664 464 ProSiteProfiles Zinc finger Dof-type profile. 126 180 IPR003851 GO:0003677|GO:0006355
Phac2g02664 464 MobiDBLite consensus disorder prediction 17 49 - -
Phac2g02664 464 MobiDBLite consensus disorder prediction 61 112 - -
Phac2g02664 464 MobiDBLite consensus disorder prediction 270 289 - -
Phac2g02664 464 ProSitePatterns Zinc finger Dof-type signature. 128 164 IPR003851 GO:0003677|GO:0006355
Phac2g02664 464 MobiDBLite consensus disorder prediction 270 284 - -
Phac2g02664 464 PANTHER CYCLIC DOF FACTOR 2 1 463 IPR045174 GO:0003700|GO:0006355
Phac2g02664 464 MobiDBLite consensus disorder prediction 415 437 - -
Phac2g02664 464 MobiDBLite consensus disorder prediction 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02664 Phac-Chr2 27989334 27993498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02664 9 462 C2C2-Dof Transcription Factor Family AT5G39660 38.889 9.54e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac2g02664 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02664 - - gmx:100813315 666.381