Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g02301 ATGTCACCCGATGACATACCACCTTCAAAGCCAGCCACAACAGCAACAACAGACCAAGAGACTCAAAGTTCAGGTGGTAGAAAAGGGTCCTCCACAAGGCCTCAAGAGCAGGGCCTGAAGTGTCCACGATGCGACTCACCCAACACCAAATTCTGCTACTACAACAACTACAGCCTCACACAGCCAAGGCATTTCTGCAAGACATGTAGAAGATACTGGACAAAAGGTGGGGCGTTGCGTAACGTCCCTATTGGCGGTGGATGCAGGAAGAACAAGAAGGTGAGGTCATCAAGGCTTTCATGTGACTCCAAGGACTCTGGTTCCTCCTCTTCAGACCTTGTTGGTGGCCTCAAGTTCCTTCATGCTCTTCCTCCTTCCATGGACTTTCACCTTGGGGGGTTACCCTTCCCTAGGCTTCACCATCACCCTCCAGCAACTTACAACCAATTTTCCTCTTTTGGGGACACTTCTAGTGCTTCTTCCTGTTTCAACCTTGACCCTTCTCCTGGCACCACCCCAAGTTCTTTCGCTGCTCTTAATTACCCCTTCTCTTACAATGGTGCAATCCAAGGTATGAGCGCTATGAATGTTCACAGTGGTCACGCTTCTTCCATTGAGTCTTTGAGTTCAATAAACCAGGACTTGCACTGGAAGCTACAGCAGCAGCGATTGGCAATGCTGTTTGGTGGAGATAACAACCAGAAAGATCATAGTGGTAGTGGTGGAGTGTCATCAGCGGCTAACCATCTTGAGAACCAGACACAGAAACCACAACCCATTTTGTTTCAAAATCTTGAGGTCTCAAAGGCAGGGATTTTCCCTGTTGAGAACTGTAGAAAAGAACATGGTCCAAGTGGGGACACACACACACCCTCCACTGAGTGGTTCTTTGGGAATTCTTATGCCTCGGTGACTCCTACTCCTACTGCTACTACTACCAGTAGTGGTGGCCCAGGGAATGATAATGCAAGCAATTGGAGTAGCGGTGTCAATGCTTGGGGCGATGTGCCGCAGCAATATACTGCTTTGCCCTAG 1035 0.4899 MSPDDIPPSKPATTATTDQETQSSGGRKGSSTRPQEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVRSSRLSCDSKDSGSSSSDLVGGLKFLHALPPSMDFHLGGLPFPRLHHHPPATYNQFSSFGDTSSASSCFNLDPSPGTTPSSFAALNYPFSYNGAIQGMSAMNVHSGHASSIESLSSINQDLHWKLQQQRLAMLFGGDNNQKDHSGSGGVSSAANHLENQTQKPQPILFQNLEVSKAGIFPVENCRKEHGPSGDTHTPSTEWFFGNSYASVTPTPTATTTSSGGPGNDNASNWSSGVNAWGDVPQQYTALP* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g02301 344 MobiDBLite consensus disorder prediction 280 344 - -
Phac2g02301 344 MobiDBLite consensus disorder prediction 7 37 - -
Phac2g02301 344 MobiDBLite consensus disorder prediction 288 335 - -
Phac2g02301 344 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Phac2g02301 344 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 225 IPR045174 GO:0003700|GO:0006355
Phac2g02301 344 MobiDBLite consensus disorder prediction 1 41 - -
Phac2g02301 344 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Phac2g02301 344 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g02301 Phac-Chr2 24628427 24630331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g02301 30 344 C2C2-Dof Transcription Factor Family AT5G65590 39.752 3.89e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac2g02301 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g02301 - - gmx:100780729 556.599