Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01562 ATGGAAAGAGGCAGAGGCAGTTATGGTGACCGTGGCAGTGGTAGTTATGGTGGCGGTGACGGCAATGCTGGCCGCTACAATTCCCGTGACCGATACGGCAGTGCTGGTCGTAGCAGTTACGGCGGAGGTGACAGTTACAGTGGCCGTAGAGGAAGGTTTTACCAACGTCCTCAGCTAAGTAGTGGCAATGAACAAAGGTCTACTTCCCAACCACAACCACAAGCCCGGTGGCAACCGAAGGTAAACCCTTCTTCCGCTGGTGAATCTTCAGAACCTCACGCTTCTCAACCTCAAACTGAAACTGAAACTGAAAAACAGACTATTCAAAATCCAGAAGTTGGAGCTTTGAGGATATCAGAGCAGAAAGCAGAGAGTATCAGACCAATGCATAGGCCTGACAAAGGGGGAACAATGGCAGCACAGAGAAACGCGCTTGAGGTGAACCATTTCCATGTTGTGTTCGATGAAAAGAGAGTGATATTCCACTACGATGTGGACGTGAAGGCCAAGGCTCCGCCCATGAACAATCGGCCTCAGAAGATTTCCAAGTTTCATCTGTTGTTGATTCGGGATAAGCTGTTTTCCGATCACGCGTTCCCGAATTCGGCGTACGACGGCGAAAAGAACATGTTCAGCGCGGAGCGGTTGACGGAAGGAACCTTCGATGTGGAGGTGGTGAAAGGTGGGGACGCAAGAAGAATGGTTTGCTATTCCGTAACTCTTACACTTGTGAAGGTGCTTGAACTCCGCAAGTTGAGAGATTACTTGAGTGGAAAGGTTCTTTCGATTCCTAGAGATGTTTTACAGGGCTTGGATTTGGTAGCGAAGGAGAATCCCACGAAGCAGTGTGATATGGTTGGGTGCTGCTTCTTCCCCAAGGACCATCCCATAAGTCCGATAGACTCTAAAGGGATAATTGCAACAGGAGGGTTTCAGCAGAGTCTTAAGCCCACTTCTCAAGGCTTGTCCTTGTGCCTCGACTATTCCGTTTTATCGTATTTTGGGGAGGACAAACCGGTGTTGAAGTTTCTGCACGAACAGATTGAGAACTTCAACTTGAGGATGTTTCACAAGTTCAAGAAAAGAGTTGAGGATTTACTTGTCGGGTTGAAAGTTAATGTGACCCACCGGAGGACGAAGCAGAAATACACTATAACAAGGTTGACACCCATGGTTACGAGCAAGATCAGATTCCCTGTTTTGGACACTGATGGATGGATTCCAGAACCGGAGTGTAGTCTGATTGATTACTTTTTCAGGAAGCATCAGGTGGAGATTCAACACAAGGACATTCCTGCCTTGGATTTTGGAGGCAACAAGATGAATTATGTACCTATGGAGTTGTGTGTGTTGGTTAAGGATCAAATATGCCCCAAAGGTAACTTACTGAATACAGATGCTGGCAGTGTGTTGAGAAGCATGTCATTGGCTTCTGCAGGAGAGAGGCGAAATAAAATAAGAACTATAGTGAAATCAGAGGAAGGACCGTGTGGGCCTCACAGAATCTCATTTGACAGTGGTGGTGTTATTGAGAGTTTTGGAATGCGTGTACACACTTCCATGACAAAAGTGACTGGACGTGTAATTCAGCCCCCAGAATTGAAGATAGCTAATCGAAGTGGTGAGATTATTAGTATGGCACTGGAAGTGGGGAAACCTCAGTGGAGTCTAAAGGAAGGATCAATGGTTGAAGGCAAGCCGCTTAAATGTTGGGGCATTCTTTATTTTTCTGATTCCAAGTGCCAATTTAAAAGCGAGCAGTTCATTAAAAATCTTCGTAGGAAATGCGGATTACTCGGCATTGAAATGGGGAAGCCAGCTTGGTCTGAAGAATTTTCTATCTCGATTCTTCGCAAATACGATTCGCTGTGTGAATTACTTAAAGAAATTGATTGTCAGGTTCAACAAAAATGTGAACAACGGCTGCAGATTCTTCTTTGTGTGATGGCCGAGAAAGATTCAGGTTACAAGTGCCTCAAATGGATTGCTGAGACCAAGGTTGGGGTAGTGACACAATGCTGCTTACGTTCTCATGCTAATGATGCCAAGGACCACTTTCTTACAAATCTTGCCCTCAAAATGAATGCCAAAGTTGGAGGAAGTAATGTAGAGCTCATGAATAGGCTTCCAAACTTTGACGGCCAAGGTCATGTTATGTTCATAGGAGCTGATGTTAATCATCCAGCTTCCAGGGACATCAACAGCCCATCAATTGCTGCCGTAGTTGCCACTGTTAATTGGCCTGCTGCAAATCGCTATGCTGCACGTGTTTGTGCTCAACGTCATCGGGTTGAGAAAATTTTGAATTTTGGGAGAATTTGCCTTGAACTAGTTTCATATTACAATAGGTTGAACAAAGTGTGGCCAGAAAAAATTGTTATCTTTCGAGATGGCGTGAGCGAAAGTCAATTTCATATGGTTCTCACGGAAGAGTTGGAAGATTTGAAATCAGTGTTTCGTGATTCAAACCACTCGCCAACCATCACTCTTATTGTTGCACAAAAGCGACATCATACTCGATTTTTTGTGAAGGATCGAAATTTCAATGTGTTACCTGGAACAGTTGTGGACACAAAAGTAGTACATCCTTTTGAATTTGACTTCTACCTTTTTAGTCACAAGGGGATCTCGGGTACAAGCAAGCCCACTCACTATCATGTGTTATGGGATGAGCACAAATTTACATCTGATGATTTGCAGAAACTCATATACGAAATGTGCTTTACCTTTGCAAAGTGCACTGGACCTGTATCTTTAGTTCCTCCAGTGTACTATGCTGATCTAGCTGCATATAGAGGCCGGTTGTACTATGAAGCAATGAATGAAACCAAATCTGCTCGCTCTGCCACTACTCGATCTTCTTCGGCAGTTTCTAATTTAAATGATGAAGGGTGTTACAAGTTGCACCCCGATGTGGAAAACCTGATGTTCTTCATTTGA 2940 0.4442 MERGRGSYGDRGSGSYGGGDGNAGRYNSRDRYGSAGRSSYGGGDSYSGRRGRFYQRPQLSSGNEQRSTSQPQPQARWQPKVNPSSAGESSEPHASQPQTETETEKQTIQNPEVGALRISEQKAESIRPMHRPDKGGTMAAQRNALEVNHFHVVFDEKRVIFHYDVDVKAKAPPMNNRPQKISKFHLLLIRDKLFSDHAFPNSAYDGEKNMFSAERLTEGTFDVEVVKGGDARRMVCYSVTLTLVKVLELRKLRDYLSGKVLSIPRDVLQGLDLVAKENPTKQCDMVGCCFFPKDHPISPIDSKGIIATGGFQQSLKPTSQGLSLCLDYSVLSYFGEDKPVLKFLHEQIENFNLRMFHKFKKRVEDLLVGLKVNVTHRRTKQKYTITRLTPMVTSKIRFPVLDTDGWIPEPECSLIDYFFRKHQVEIQHKDIPALDFGGNKMNYVPMELCVLVKDQICPKGNLLNTDAGSVLRSMSLASAGERRNKIRTIVKSEEGPCGPHRISFDSGGVIESFGMRVHTSMTKVTGRVIQPPELKIANRSGEIISMALEVGKPQWSLKEGSMVEGKPLKCWGILYFSDSKCQFKSEQFIKNLRRKCGLLGIEMGKPAWSEEFSISILRKYDSLCELLKEIDCQVQQKCEQRLQILLCVMAEKDSGYKCLKWIAETKVGVVTQCCLRSHANDAKDHFLTNLALKMNAKVGGSNVELMNRLPNFDGQGHVMFIGADVNHPASRDINSPSIAAVVATVNWPAANRYAARVCAQRHRVEKILNFGRICLELVSYYNRLNKVWPEKIVIFRDGVSESQFHMVLTEELEDLKSVFRDSNHSPTITLIVAQKRHHTRFFVKDRNFNVLPGTVVDTKVVHPFEFDFYLFSHKGISGTSKPTHYHVLWDEHKFTSDDLQKLIYEMCFTFAKCTGPVSLVPPVYYADLAAYRGRLYYEAMNETKSARSATTRSSSAVSNLNDEGCYKLHPDVENLMFFI* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01562 979 Pfam Piwi domain 645 937 IPR003165 GO:0003676
Phac2g01562 979 Gene3D - 528 706 - -
Phac2g01562 979 Gene3D paz domain 332 457 - -
Phac2g01562 979 Gene3D - 714 979 IPR036397 GO:0003676
Phac2g01562 979 SMART PAZ_2_a_3 338 470 IPR003100 GO:0005515
Phac2g01562 979 Pfam Argonaute linker 1 domain 286 330 IPR014811 -
Phac2g01562 979 SUPERFAMILY PAZ domain 333 491 IPR036085 GO:0005515
Phac2g01562 979 SMART Piwi_a_2 644 938 IPR003165 GO:0003676
Phac2g01562 979 Pfam N-terminal domain of argonaute 145 274 IPR032474 -
Phac2g01562 979 SUPERFAMILY Ribonuclease H-like 633 939 IPR012337 -
Phac2g01562 979 SMART DUF1785_2 284 336 IPR014811 -
Phac2g01562 979 ProSiteProfiles PAZ domain profile. 338 453 IPR003100 GO:0005515
Phac2g01562 979 CDD Piwi_ago-like 509 937 IPR045246 -
Phac2g01562 979 MobiDBLite consensus disorder prediction 54 114 - -
Phac2g01562 979 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 141 943 - -
Phac2g01562 979 CDD PAZ_argonaute_like 339 452 - -
Phac2g01562 979 Pfam PAZ domain 346 460 IPR003100 GO:0005515
Phac2g01562 979 ProSiteProfiles Piwi domain profile. 644 938 IPR003165 GO:0003676
Phac2g01562 979 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01562 Phac-Chr2 15291686 15295520 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g01562 2 15291686 15295520 Phac2g01562 2 15291686 15295520 ECH