Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02843 ATGGAGAGAGGGTGGAAAGCTAATAGTGTTGAGATTTCACCGAACTGTCCCAGGTGTAGTTGTTCCAATACCAAGTTCTGCTACTACAATAACTACAGTTCAACTCAACCACGGTACTTTTGCAAGGGCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTACCAATTGGTGGTGGCTGCCGCAAAAGTAGAAGGGGTAGATATAATAAGACCTTAAGACAAGCCAATAGCCCAGTTGGGCATTCTGATTTAAGGCCTTCATCTTCAGTGATGTCTGATGGGCCAAATATTGATATAGCTCAAGTCTATGCAAGTTTTCTCAACGTGAAGCCAGATCAAGTGCAAACATTTTGCTCTCCTTCTCCTGAGTATTCAAGCATAATTAACACTGATTTTGGCCACAGTGCTTTGTCTGAAGAGCACGGTCTTACCGGGCGCTTGCATTTTCATGAACAGCCCACAGAATCCTATTTTAATGAGGATATCGGAATGTACTTTTGTGGGTTGAACTCTATTCAGAAGCATAAAGAATATAGTAGCAGTCATGATACATCAGTTACAAAAACAAATTTTGAGTTGCCCCCATTACCAGGTGAAGATGCAGAAACCTCACATGGTAATGTGTTGTGGTCCAATTCTGAGATGATGGTAGATCATGGTTTGCAAGCCACCCAATGGCCCCTTTTTGAACCAGAAGCTTATGATGCAGACTTCTTAATGGGTAACTGTTGGAGCCACTTCGATTTGCCAAGGGATGCTTCTTTTTCCACGCCTTGA 786 0.4338 MERGWKANSVEISPNCPRCSCSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGRYNKTLRQANSPVGHSDLRPSSSVMSDGPNIDIAQVYASFLNVKPDQVQTFCSPSPEYSSIINTDFGHSALSEEHGLTGRLHFHEQPTESYFNEDIGMYFCGLNSIQKHKEYSSSHDTSVTKTNFELPPLPGEDAETSHGNVLWSNSEMMVDHGLQATQWPLFEPEAYDADFLMGNCWSHFDLPRDASFSTP* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02843 261 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 13 171 IPR045174 GO:0003700|GO:0006355
Phac1g02843 261 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Phac1g02843 261 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
Phac1g02843 261 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02843 Phac-Chr1 37464421 37467299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02843 5 256 C2C2-Dof Transcription Factor Family AT3G52440 40.441 2.63e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac1g02843 zf-Dof 2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02843 - - gmx:778109 387.111