Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01465 ATGTCTGAGACAAAGAAGGATCTGGGTATCAGGCTATTTGGCCGGAAGATTCCGGTGCCGGAATGTCAGATTCCGGCCAACTCTGGACCCACGGATGCTTGCAGCAGCATAGAAAAGGCAGAACTGGAAATGCCTAGTGAATGTGGAGAAAAATCTGAAAAACAAGAAAAGTTTTGTGATTCAAGGGATAGTAAACAAGAGTTCCAACATAAAGTGAAGGAAAATGAGCCAATAGTAAACCCTAAACAAGTGGAAGATAATACGGAGAATGGTGATTCAGACCAAGATAAAGTCTTGAAGAAACCAGACAAGATTCTTCAGTGTCCTCGATGTAACAGTTTGGACACCAAGTTTTGTTATTTTAACAACTACAACGTTAACCAACCCCGGCATTTCTGCAAGAACTGTCAAAGGTATTGGACTGCTGGTGGAACAATGAGAAATGTTCCCATAGGAGCTGGGAGACGGAAGAATAAACACCTAGCGTCTCAGTACCGACACATTATGGTCTCTAATGGAATTCCTACCTCCAGACTACAAACTGAGGACACATCTGGTTTCCAACATGTCACAAGTCTTGAATCCTCAGTTCCTTTCAGGTCTTCAGCAGATAACAACAGCACTGTTTTGAAATTTGGGCCAGATACCCCTCTTTGTGAATCAATGGATTCAATGCTTAATCTTAGAGACGAGAGAAGATGTGTTGATGCAAGTTCTATAAACCGTGTAGAGTATGCTGGGGAACCATCTTTATGTGGATCTTCTGTGACGAATAATGGTACTCAAGGAAATGAATTATCAGAACATAAGACATCAAATTGGTTACAATGTTACCCTGTTCCTCCATGGGTATTGCCTTATCCAGGTTGGAATAATGTGAATTCCATGGAAGTAGTTCATCAGTCTTCAGCACCAATGTGTAGTCCATACAACACTGGTCCTGCTGCAATGCAATGGTGTCCCACAGCAATGGTGGCAATTCCTGGCATGTGCCCACCAAGCATTCCTTTGCAACTTGTACCACCATCATGCTGGAGTGGAACACCACTTTGGAATGCTGGAACTGGGGCAGTGTCCATAGGATCCAATGCTTGCCTTTCGCCGTCTTCCTCCACGAGTAACAGTTGCTGCTCGGGCAATGGCTCCCCAACCCTTGGCAAACACGCTAGAGATACGGTTTTTGCTGATGAAGAGAAATCAGAGAAGTGTGTTTTGGTTCCAAAGACCATCAGAATTGATGCCTCAAAAAGTCCTATAAGGGCTGCATTAACCATCCAGCCTGATCAACAGCAATCTCTATCAGGTGATATTTTGAAGAAAATTGAACCAAAAGAAGGCAAAGATCGCATATTGGGTGCCTCTCAAATCTTGGAAGCCAATCCAGCAGCTATTTCTCGTGCTCATGCATTTCAGGAGAGCATTTAG 1425 0.4358 MSETKKDLGIRLFGRKIPVPECQIPANSGPTDACSSIEKAELEMPSECGEKSEKQEKFCDSRDSKQEFQHKVKENEPIVNPKQVEDNTENGDSDQDKVLKKPDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRHIMVSNGIPTSRLQTEDTSGFQHVTSLESSVPFRSSADNNSTVLKFGPDTPLCESMDSMLNLRDERRCVDASSINRVEYAGEPSLCGSSVTNNGTQGNELSEHKTSNWLQCYPVPPWVLPYPGWNNVNSMEVVHQSSAPMCSPYNTGPAAMQWCPTAMVAIPGMCPPSIPLQLVPPSCWSGTPLWNAGTGAVSIGSNACLSPSSSTSNSCCSGNGSPTLGKHARDTVFADEEKSEKCVLVPKTIRIDASKSPIRAALTIQPDQQQSLSGDILKKIEPKEGKDRILGASQILEANPAAISRAHAFQESI* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01465 474 MobiDBLite consensus disorder prediction 44 98 - -
Phac1g01465 474 Pfam Dof domain, zinc finger 103 160 IPR003851 GO:0003677|GO:0006355
Phac1g01465 474 PANTHER CYCLIC DOF FACTOR 2 1 473 IPR045174 GO:0003700|GO:0006355
Phac1g01465 474 ProSitePatterns Zinc finger Dof-type signature. 108 144 IPR003851 GO:0003677|GO:0006355
Phac1g01465 474 ProSiteProfiles Zinc finger Dof-type profile. 106 160 IPR003851 GO:0003677|GO:0006355
Phac1g01465 474 MobiDBLite consensus disorder prediction 44 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01465 Phac-Chr1 17638495 17641544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01465 7 473 C2C2-Dof Transcription Factor Family AT5G39660 34.783 3.49e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac1g01465 zf-Dof 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01465 - - gmx:100813787 798.89