Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00317 ATGAAGTATCTAGGGATTGATTTTAGCTGCGCCGTGGAATCGCTCCGCCACGGCCACTTCCCGGAGAAGAATTGCTTGCTCCCTCTCATTTCCAAACTCCTCGGCTACGCCATCGTCGCCGCCTCCACAACCGTCAAACTCCCCCAGATTCTGAAAATTCTGAAGCATAAGAGTGTGAGAGGCCTTAGCATGATTTCCTTTGAGCTCGAAGTTATCGGATACACCATCGCGTTGGCTTACTGTCTCTACAAAGGCATGCCATTCTCAGCTTACGGAGAGTTGCTGTTTCTTTTGATTCAAGCTATAATATTGGTTGCCATAATCTACTATTATTCTCGACCTTTGAATACATTTACATGGATCCGGGCATTGCTATATTGTGCTGTAGCACCCACTATCTTAGCTGGTCAAATTGATCCTTTCCTCTTTGAAGCTCTGTATGCATCCCAGCATGTAATTTTTCTCTTTGCCAGGATCCCACAGATATGGCAAAACTTTTCTAATAAAAGTACTGGGGAACTCAGCTTCTTAACTTCTTTTATGAACTTTGCTGGTTCAAATGTTAGAGTATTCACAACTATCCAAGAAAATGCACCATCCAGTGGTAGGTTTCTTCTTACTTTGTTTTCATCTTCATGA 639 0.4304 MKYLGIDFSCAVESLRHGHFPEKNCLLPLISKLLGYAIVAASTTVKLPQILKILKHKSVRGLSMISFELEVIGYTIALAYCLYKGMPFSAYGELLFLLIQAIILVAIIYYYSRPLNTFTWIRALLYCAVAPTILAGQIDPFLFEALYASQHVIFLFARIPQIWQNFSNKSTGELSFLTSFMNFAGSNVRVFTTIQENAPSSGRFLLTLFSSS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00317 212 Pfam PQ loop repeat 30 88 IPR006603 -
Phac1g00317 212 Pfam PQ loop repeat 150 200 IPR006603 -
Phac1g00317 212 SMART ctns 44 75 IPR006603 -
Phac1g00317 212 SMART ctns 156 187 IPR006603 -
Phac1g00317 212 Gene3D - 150 209 - -
Phac1g00317 212 Gene3D - 29 113 - -
Phac1g00317 212 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 4 201 IPR016817 -
Phac1g00317 212 PIRSF Mpdu1 6 212 IPR016817 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00317 Phac-Chr1 1991214 1998583 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00317 1 201 Miscellaneous Gene Families AT4G07390 78.109 8.57e-118 333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00317 1 1991214 1998583 Phac1g00317 1 1991214 1998583 ECH