Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00266 ATGCTGAAATCAGGCATGGGAATGAATGCGAGTAAGCAGGTGAAAAAAGCTGCTAAAGCAAGTTCCAGAAAGGGGTGTATGAGGGGCAAAGGAGGCCCTGAGAATGCCACTTGCACCTTCAAAGGTGTGAGGCAGAGAACTTGGGGCAAATGGGTGGCGGAGATCCGTGAGCCCAACCGTGGTGCACGCCTCTGGCTAGGCACATTTGAGACCTCTTTAGAGGCTGCCATGGCCTATGATGGTGCAGCACGCAAGCTCTACGGATCTGATGCAAAACTCAACCTCCCAGAGCTTCCTCTGCTCTTCAATTTCCAGTTTCCACCACCAAATCCTTCTCCCAACCCTCAGATCCCCCACATGCCACCACCCCCACAGCCTCAAAACCCTCAGATTCCCCTTTTCTATGATCTTTTCAATCTCTCCCCCTCTGATTTCATCAACACCCTCTCCAATAACACCAACATCATCACCAACCCTGTTGTCTCCCTGCCCCCTCAGCATGCAATTGCTGATTCTGCCCCTGTGTACACCAGCGACTCTCTTGTCGCAATTCCCTGTGAATCCACCACCACCACCACCATGGAAATTTACCCCTCCTCCAATCCTGTGGAGATCAACAAGGTTGATCCTTTTTTGTCATTCAATGACACTCCTGACCCCATGTTTGAAGAGTCCATCTGGGCTGAAGCAGCCATGTCTCTGGATTTCCCTCTCATACCAGATGCTACTGGAATTTATGAAGCTGAAACCTTTCTTGAAGTGGGTCCTTGGGACTCTCTGCTGCAAAATCCCTGGTGCATGTAA 804 0.5062 MLKSGMGMNASKQVKKAAKASSRKGCMRGKGGPENATCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFETSLEAAMAYDGAARKLYGSDAKLNLPELPLLFNFQFPPPNPSPNPQIPHMPPPPQPQNPQIPLFYDLFNLSPSDFINTLSNNTNIITNPVVSLPPQHAIADSAPVYTSDSLVAIPCESTTTTTMEIYPSSNPVEINKVDPFLSFNDTPDPMFEESIWAEAAMSLDFPLIPDATGIYEAETFLEVGPWDSLLQNPWCM* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00266 267 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Phac1g00266 267 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 13 141 - -
Phac1g00266 267 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Phac1g00266 267 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Phac1g00266 267 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Phac1g00266 267 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Phac1g00266 267 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Phac1g00266 267 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Phac1g00266 267 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Phac1g00266 267 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00266 Phac-Chr1 1651742 1653007 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac1g00266 AP2 3.8e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00266 1 1651742 1653007 Phac1g00266 1 1651742 1653007 ECH