Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00092 ATGGAGGGAGAGGATGTTAGGTCTGGGACCAGGAAGAAGCGATCCAAGAAGGAAATTGGTTTTGACTCTGACGACGACGAGCCCATTGGGTCAATCTTCAAGCTGAAGAGGGCCAAGAGGAAGGGTAGTGGCAGTGGTGAGGCTGTTAGGGAGAAGGAGGATTTGGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCTAAGAGAGATCAGGGATCTGGGGTTGCAAGAGGACCAAGTCCTGCTTTGCATGTGTCTGATGAAGATTTGGTTGGATTGGGAGCTAAGGGTAAGGATGAGAAAGGGGTGGCCTTGGTGCCTGGTGGTGTGGACATGCAGATGCAGATGCAGGATTCTTCTGATCAACACATGGAGGATTCGTTGTCTGCGATTTTTCACAAGGCACAGTCTAGTTCTGCTAGGAAATCTCGTGGGGGTTCGAGACAGAAAAGGGGGATTCAGAAGGTGGATGGTGGGTTGAGCCCTGGAGGTTTTGTGGAAGCTGTGGATTCTGTGGTTGAAAGTAGATCCGGATCTGCTTCTGGCTCGAAGTTGGTTGGGGGGAATGCCATGTCTGATGATGCTTTACCTCAAGCCTCTGAACCGGTTGTGACATCTGTGGTGGAGGATCAGAAGTGTGTTAATGACTGTTTTCAAGAGGAAATTGCGAAGGGTGAATGTGATTTGGACATGCCAGATGGATTGAATCAGCCAAAAGATGTCTATCATGAAGATGGGAAGCAATTTTCTTGTGCTCTAAAAGCTGAAAATATTTCTTGTGATTCTGACCAGAAGGTTGCATTGCAGGAAAGCGTTGTTATCAGTGGTGGTTTACATAAGTTATCTTCCATGTTACTCGATGAAATAGTTGATACTGCCTCTCTCTCAAAAGTGGGGGAAGGGGAAAGCCAACTTACAGAGGTCGGAGAGCCTGAGAATAGATTGACTGATGAACTAGTACAGGCATGCAACAGTGCTTCAGAACATGATGTTTCTACTTCTGCAGGAAAAGAAAATGTCTTGACATCTTGGCACACTGAACCGTTGATCAAATCAACTGAAAATGTATTGAAAGAGAATGATGATATGGTTTCTGGAAAAGGTTTTCAGGAATCCTCAAGGAATGGAGCTCTAAAGTTATCTGGATGCCACATGGAAGTAGATGTAGGTGGAAAATCAGAAACTGAGTTTGTTTCTGATGGAAATTTATGTGATTATAGTAATTTAGATACAAAGGCTGAAGTGCAAGATTTTGTTCTAGGTTTTTCACCTAAGAGAAATGATGTAACTGTCAGTGGTTCTTCCATGGTGTCTAATGAAGCTGAATTGGATGCCCACTCAAATCACCCAGAGAAACCTATAGAAGCTTGCAATATTCCAAAAGGCCCCACTGTTTCAATTCTGAAATGTAGCTCAGTTTTAGATCCAGTTCATTCGGATGGATCCTCTCTTCAATCTTCAATTCCAGATGAAAATGGGAACTCTGCAGAATACCACACCTCTGTCTCTGATTTTGTTGATAACGATGGTAAGATATCAGGCATTACACGGGTGGTGCGAAAGACCAAAATGCGTAAGCATGGAGACATGACATATGAGGGGGATGCTGATTGGGAGGTTTTAATTAATGATCAAACTCTAAATGAAAGTCAAGTTATGACAGATGTTGACCGCACTCTTAGGACAAGAATGAAGCATGATTCTTCTTTGAATACCGGTGAAGAATCTGAAAATGTTGCAGTAGTAGCGGTATCAGCTGGGCTGAAAGCCCGTAAAGCAGGTCCAATCGAGAAAATAAAGTTTAAAGAGATCTTGAAGCGAAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAAATTTTAAGTCTTTGGAGCCAAGATGTCACACGGATATTGCCTCTTGCTGAATGTGGAGTTAGTGATACTGATTATGAGGATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCCCAGAAGGAGAATGTTGGAAGTAGTGCCAGGCACTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTCGCAGCTTCAATGGCTGACTCTGAAGATGGAGTTTCCTTTCTTGTTGGGCAGACTAAAATGTCAGATACTTTCAATGAGATTAACAATGGTCTACCTAAGGATTGCAATGACCTAACAACTGAAGCTACAGAAGGCATGGGGCACAGTAATGAAGTGAAGTTGGATTTATCAAACATATCACAACAGGCAGAAGGAAAAAAAATTGATTACCAGGAAAATGATGGGTTTCAGGATGGAACTATTGACAATTCCGTTCCTTCATCCAACTTTGCTGATTGCAGATTAATGTCTCTGGAAGCTAAAGAGAAAAGCAATGAATCTACCTGCATTAAATCTGTCTGGGGTGGTCAGGTAGGTGACAATCTGCAGTCTGATTTAGATCCTAGAAAGAGAGTAATTGTGATTGGAGCTGGGCCTGCCGGGCTAACTGCTGCTCGCCACTTGCAACGTCAGGGATTTCCTGTAACTGTTCTTGAGGCTAGGGGTAGGATAGGAGGTCGTGTGTTTACTGATCACTCCTCACTTTCTGTCCCTGTTGATCTTGGTGCTAGCATTATAACTGGTGTCGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCGTTGATTTGTGCTCAGTTGGGCCTTGAGTTGACGGTGTTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGAACAAAAAGTTCCTGCAGATATGGATGAAGCACTTGAAGCTGAATATAATACCCTTATAGATGACATGGTATTGGTTGTCGCTCAGAAAGGTGAACAAGCAATGAAAATGTCTCTTGAAGATGGTTTAGAATATGCCCTCAAGATTCGGCGTATGGCACGCTCTGAAAGCAGTGAAGAAACTGAACAAAATAATTCTGCAGATAGACCATTTGATTCCAAAAGGGACAGTTCTGTGGAAAAAAAGCTTGATGAGGAGATTTTGAGTCCTCAGGAGAGAAGGGTTATGGATTGGCACTTTGCTCATTTGGAATACGGTTGTGCTGCTTCACTTAATGATGTTTCTCTTCCCTACTGGAATCAAGATGACGTGTATGGAGGTTTTGGGGGAGCTCATTGTATGATTAAAGGGGGTTACAGCTCTGTCGTTGAGTCTCTGGGAGAAGGAAATACAATTCACTTGAATCATGTTGTAACAAATGTGTCATATGGGATCAGGGAGCCTGGTCAGAGTTATAAAGTCAAAGTTTCTACATCAAATGGCAATGAGTTCTTTGGTGATGCTGTCCTTGTTACTGTTCCACTTGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCACCTTTGCCACAGTGGAAATGTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGCTTTGGAATTTCCTAGTGTATTTTGGGATGATGCTGTGGACTACTTTGGAGCAACAGCTGAAGAGAGAAACAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTAGGGGCTCCTGTCCTTATTGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAACTTGAGCTCTTCCGATCATGTTAAACATGCATTGAAGGTTCTCCGAAAACTTTTTGGGCAGGATTCAGTTCCAGATCCCGTTGCCTATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTACGTTAAGGTTGGAGCCTCAGGAGAAGACTATGATATATTAGGGAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGATACTGTTGGTGGTGCAATGATGAGTGGCCTAAGAGAGTCTGTTCGCATAATTGACATATTGAGCACTGGAAATGATTATATTGCCGAGGTGGAGGCATTAGAAGCTGCAAGGGGACAGTTAGATCCCGAAAGGGATGAAGTGAGGGATATAATAAAGAGACTTGATGCAGTAGAACTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGAAGCTTTGTTAAGGGAAATGTTCTTTAATACGAAAACCACTGGTGGACGCTTGCATGTGGCCAAACAATTGTTAACTCTTTCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTAGCCATTCTCAATTCATGGATACTGGACTCAATGGGAAAGGATGGGACCCAACTCTTGAGGCACTGTTTGCGACTTCTTGTCCGTGTTTCAACTGATCTTCTTGCTGTACGATTATCAGGAATGGGAAAAACAGTGAAGGAAAAAGTTTGTGTGCATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTTCGCAAGGAAAAAGCTTCTAATGGTGGATTGAAGTTACCAAAACAAACAACTGTCTTAGATTCATCTAAGAGAAAATCTGCAAAAGATTCAGCTTTGGGAAAACCACCTCTGGGCACATATCATGGTACCATTGAGAATAAAGGAGGCTTGCTAAATCCTACCTCTGCTGGAAGCAATTCACCTTCCCATGCCCATGTGAAGAAATTGCAAAGCAAACAAGGAAGACAACCAGCAGCATATGACTCAAGGCATGAAGTCAGTTCTTCCAAATATAAAGGTTCAATAGACAGAGTAGCTACAGAGAAGGAGGATAGCCACTGTGCTATATCTGAAGAAGAACAGGCTGCTATAGCTGCTGCAGAGGCTGCCCGTGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGATGCAATTCGCTGTTACAGCTTCCTAAGATACCCTCATTCCACAAATTTGCTAGACGTGAGCAGTCTTCACAAAATGATGAGTGTGATAGTAGAAAAAGATGGTCAGGTGGTGTTTTTGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGAGTTAGGGATTGGTCTGTTGATTTCTCCGCAGCTTGTGTCAATCTTGATAATTCCAGAATGCCGGTTGATAACCTTTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGGGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGTGGTGTTGCAATTAAAGATCATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCAACTATTCACTTGAAGGATGAGGAGGACTCAAATGCCTGTTCAAAGCTACCGAGTTGGAAGCGTGATGGTGTTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGATGCCCTAAAGAGTCATTCCCGCGCAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTTGCATCACTGCTTATGCCCCTTTATAAGGCAAGAAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGTTTCAGGTAATGGAGCAAGCCACAGATGCAGAAAAAGCCATGACTGTTCGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGATATATTGATTGAGAGGCACATGACAATGAAATCAGATATGAAATCTTAA 5727 0.4266 MEGEDVRSGTRKKRSKKEIGFDSDDDEPIGSIFKLKRAKRKGSGSGEAVREKEDLGGMDDNDTLASFRKRLKGPKRDQGSGVARGPSPALHVSDEDLVGLGAKGKDEKGVALVPGGVDMQMQMQDSSDQHMEDSLSAIFHKAQSSSARKSRGGSRQKRGIQKVDGGLSPGGFVEAVDSVVESRSGSASGSKLVGGNAMSDDALPQASEPVVTSVVEDQKCVNDCFQEEIAKGECDLDMPDGLNQPKDVYHEDGKQFSCALKAENISCDSDQKVALQESVVISGGLHKLSSMLLDEIVDTASLSKVGEGESQLTEVGEPENRLTDELVQACNSASEHDVSTSAGKENVLTSWHTEPLIKSTENVLKENDDMVSGKGFQESSRNGALKLSGCHMEVDVGGKSETEFVSDGNLCDYSNLDTKAEVQDFVLGFSPKRNDVTVSGSSMVSNEAELDAHSNHPEKPIEACNIPKGPTVSILKCSSVLDPVHSDGSSLQSSIPDENGNSAEYHTSVSDFVDNDGKISGITRVVRKTKMRKHGDMTYEGDADWEVLINDQTLNESQVMTDVDRTLRTRMKHDSSLNTGEESENVAVVAVSAGLKARKAGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSQDVTRILPLAECGVSDTDYEDGSPRSSLIREVYAFLDQYGYINVGIASQKENVGSSARHCYKLVKEKGFEESLAASMADSEDGVSFLVGQTKMSDTFNEINNGLPKDCNDLTTEATEGMGHSNEVKLDLSNISQQAEGKKIDYQENDGFQDGTIDNSVPSSNFADCRLMSLEAKEKSNESTCIKSVWGGQVGDNLQSDLDPRKRVIVIGAGPAGLTAARHLQRQGFPVTVLEARGRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTEQKVPADMDEALEAEYNTLIDDMVLVVAQKGEQAMKMSLEDGLEYALKIRRMARSESSEETEQNNSADRPFDSKRDSSVEKKLDEEILSPQERRVMDWHFAHLEYGCAASLNDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGNTIHLNHVVTNVSYGIREPGQSYKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIQFSPPLPQWKCSSVQRLGYGVLNKVALEFPSVFWDDAVDYFGATAEERNSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQNLSSSDHVKHALKVLRKLFGQDSVPDPVAYVVTDWGRDPFSYGAYSYVKVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLRESVRIIDILSTGNDYIAEVEALEAARGQLDPERDEVRDIIKRLDAVELSNIMYKNSLDGAQILTREALLREMFFNTKTTGGRLHVAKQLLTLSVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKLPKQTTVLDSSKRKSAKDSALGKPPLGTYHGTIENKGGLLNPTSAGSNSPSHAHVKKLQSKQGRQPAAYDSRHEVSSSKYKGSIDRVATEKEDSHCAISEEEQAAIAAAEAARAKALAAAEAYASAEARCNSLLQLPKIPSFHKFARREQSSQNDECDSRKRWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESVAGDSSIYTKAWIDTAGGVAIKDHHAIERWQSQAAAADSYFSNPTIHLKDEEDSNACSKLPSWKRDGVANESSISQVTVNKDALKSHSRAADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKFQVMEQATDAEKAMTVREFLDFKRKNKIRSFVDILIERHMTMKSDMKS* 1909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00092 1908 MobiDBLite consensus disorder prediction 1500 1577 - -
Phac1g00092 1908 SUPERFAMILY FAD-linked reductases, C-terminal domain 1154 1265 - -
Phac1g00092 1908 MobiDBLite consensus disorder prediction 1537 1556 - -
Phac1g00092 1908 Gene3D - 585 689 IPR036388 -
Phac1g00092 1908 Pfam SWIRM domain 599 676 IPR007526 GO:0005515
Phac1g00092 1908 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1414 1498 IPR035441 -
Phac1g00092 1908 Gene3D - 944 1271 - -
Phac1g00092 1908 Gene3D - 838 1314 IPR036188 -
Phac1g00092 1908 SUPERFAMILY FAD/NAD(P)-binding domain 834 1318 IPR036188 -
Phac1g00092 1908 PANTHER FLAVIN MONOAMINE OXIDASE 836 1323 - -
Phac1g00092 1908 MobiDBLite consensus disorder prediction 1 77 - -
Phac1g00092 1908 MobiDBLite consensus disorder prediction 1 109 - -
Phac1g00092 1908 MobiDBLite consensus disorder prediction 987 1018 - -
Phac1g00092 1908 MobiDBLite consensus disorder prediction 141 166 - -
Phac1g00092 1908 ProSiteProfiles SWIRM domain profile. 586 686 IPR007526 GO:0005515
Phac1g00092 1908 Pfam Flavin containing amine oxidoreductase 846 1316 IPR002937 GO:0016491
Phac1g00092 1908 SUPERFAMILY Homeodomain-like 583 681 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00092 Phac-Chr1 719866 730834 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Phac1g00092 Amino_oxidase 1.4e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00092 1 719866 730834 Phac1g00092 1 719866 730834 ECH