Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00067 ATGGCTCTCTTAACTTCCTTGCCTGAACACTCCACCACCCCCAAACGCCACAAACGAAAACCACAGCAGCAGCAGCAGCAACACCAGAAGCAGAAGCAGAAGCAGAAACAGAAAGCACCCTCTTCATGGGATCAAATCAAGAACCTCTTAACCTGCAAACAGATGGAAGGTTCGAGGGTTCACGACCCTTCAAAAGGGTACTCGAGAATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTGGTTTACTCACCAGAAAACCGGTAACCGCTTCTACACGCTCCACCGCCGCCAAATCAAACGCCGGAACAACCTACACGTCATCGTCTTCCAGGGGGATGCAATTCAGAAAGCTTTCTGGCTGTTATGAATGTCACATGATCATTGACCCCAGCAGGTTACCGGTTGCAAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGCGAAGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCTGTTTCGGAGCTGGAACCGGAGGATTCGGGTAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCGATATGCAAGATCGAACGGATACTGAAAGTGCACAATACCCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTAAAGAACCGTGCGCTGAGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGGTCATCCTCGCTGTGCGCCTCCGTACCCGGCTGCGGTGTCTGCACAATCATAAGACACGGTTTCCAAGGTGGCGGCGGAGGGGACCACGCGAAGGTCAAGGGCGTGGGAACCACCGCCAGCAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGACGGCACGCGGAGGGCCATGCTGGTGTGCAGGGTGATCGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAGCACGTGTCGGTTGCGTCCTATGATTCCGTAGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATTCTTCCTTGTTTCGTGGTAATTTATAAAGTGCCTTCGTGTTAG 1233 0.5401 MALLTSLPEHSTTPKRHKRKPQQQQQQHQKQKQKQKQKAPSSWDQIKNLLTCKQMEGSRVHDPSKGYSRIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTASTRSTAAKSNAGTTYTSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCACSHCGEVFPKMESLELHQAVRHAVSELEPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALSSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGGGGDHAKVKGVGTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTPPSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPSC* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00067 410 SUPERFAMILY ADP-ribosylation 194 406 - -
Phac1g00067 410 ProSitePatterns Zinc finger C2H2 type domain signature. 169 192 IPR013087 -
Phac1g00067 410 Gene3D - 192 407 - -
Phac1g00067 410 MobiDBLite consensus disorder prediction 91 137 - -
Phac1g00067 410 MobiDBLite consensus disorder prediction 1 43 - -
Phac1g00067 410 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 197 IPR013087 -
Phac1g00067 410 MobiDBLite consensus disorder prediction 13 35 - -
Phac1g00067 410 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 41 405 - -
Phac1g00067 410 FunFam C2H2-like zinc finger protein 193 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00067 Phac-Chr1 489085 492657 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g00067 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00067 1 489085 492657 Phac1g00067 1 489085 492657 ECH