Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00018 ATGCTCGACTCTGTCCTACTGGCGCTGTTCTTGCCCTGCCTTGGCATGAGCGCCGTCTTCATCGTCTACATGTGTCTTCTATGGTACGCCACCACTCACCGCACCGATCCGCAGCTACCGGCGAAGCCACTCCCCGACGGCGGCCTCTCCCCTGCACAGCTCCAAAACCTCCCCTCAATCACCGGAAAAGACCTTCTCATGGGCTCCGAATGCGCCGTCTGCCTCGACGACATCGCCGCCGAACAACCCGCTCGACTGGTTCCCGGTTGCAACCACGCCTTCCATGTGGAATGCGCAGACACCTGGCTCTCCAAGCACCCTCTCTGCCCTCTCTGCCGAGCCAAACTCGACCCCACGCTCTTCTCTTCCTCGGAAAATCCTTGTTGA 387 0.6047 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATTHRTDPQLPAKPLPDGGLSPAQLQNLPSITGKDLLMGSECAVCLDDIAAEQPARLVPGCNHAFHVECADTWLSKHPLCPLCRAKLDPTLFSSSENPC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00018 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 119 IPR013083 -
Phac1g00018 128 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Phac1g00018 128 SUPERFAMILY RING/U-box 63 118 - -
Phac1g00018 128 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 16 124 - -
Phac1g00018 128 SMART ring_2 71 112 IPR001841 -
Phac1g00018 128 Pfam Ring finger domain 70 113 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00018 Phac-Chr1 238123 239530 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00018 1 238123 239530 Phac1g00018 1 238123 239530 ECH