Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02744 ATGGGTGCCGTTTGTTGTGTTGCTGCCAAAGACAAAACTTTACAAAGTGCATCACCCAGTGAAATCATGCATCGGAATATTCGATATTCTCCGACATGGAACTTTAGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTGCTGTAACTTGGTTTTCTAATGGTATTAGCAGGAATGATGGATTGGAGAATAAAAATGAACCCTCGTATGTATCTGAGGATGGAAGCCCGTTGCAGAATTATCAAAGGAGTAGATCCCAAAAATCCCCAGTCTCAGAAGGAACTGCTAGGAACCTGATAAATTCATCTTCAGATCAAACTATTTCAAGGAATGTCTTGACAAATGAGAGCATGGAACAGGCGAAGAGGTTGGCTGAATCATCAACAATATCATGCCCGTATCCCACAAAACCTCTACATTCATTGCCTTCTACTTCATCAGTATCACCTCAGCCATACGATAGTCACCCATTTCCATCCAGCTCAACCACTTCAAGGTGGGCTTGCCATTCCACAGGAGAGCAACTATCTTGTCAAGTTTCTGATAGCCAAATCTTTGGATATAAGACGCCTAGCAACTCTTATGTATCTGAAGAGAGGCCAGTGTTTCCTTCGTGGAGCAATGAATCTGGTATGCACTCCCATGGCGGGTCTTCAGGTAATTGGTCTAGGTCTGGCTTTTCTGAGCTGACAGGCAGTTCCCTCAAAGAAAGATGGTCATTTGATAGTGAGTCATTTGGTTTCAATTGTGAAAGGCTGGTTAGATCCAGTAGTCGGTTTTCAAATTCTCCAGTTGATTTCCAAGCATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAATCTTCTTGGGGAACCCAAAAGATAATTGCTAGTAATGACCTTTCTGTAGTTTCTGTCCTTATTTGTGGGCATGTTTATCATGCTGAATGCTTGGAGAGTTTGACACCTGAAGTCAACAAGTACGATCCACTTTGTCCAGTTTGCACTTTTGGCGAGAAATATACTCTTAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTAAAAATAAGAAATCAAGGAACCAAATTGTGGACAGTGATATTGACGATAATTCTGTTGCGCACGAACATTTTAGAGAAAAATGGCGTCAAGCTAGTAAAGGTCTTGGAATTGATTCTAGTTCTAGTGGGAGAAGCTCTAACGGGAAACCTTTTCTTAAGAGACATTTCTCATTTGGCACAAGGAGTTCCAAATCCATGCTAGATAATCAGTCAACCCCGAAGAAAGGCTTCTTTTGGGCAAAATCTAGTAGGGAATAA 1314 0.4155 MGAVCCVAAKDKTLQSASPSEIMHRNIRYSPTWNFRWDHRGRVAGEDTAVTWFSNGISRNDGLENKNEPSYVSEDGSPLQNYQRSRSQKSPVSEGTARNLINSSSDQTISRNVLTNESMEQAKRLAESSTISCPYPTKPLHSLPSTSSVSPQPYDSHPFPSSSTTSRWACHSTGEQLSCQVSDSQIFGYKTPSNSYVSEERPVFPSWSNESGMHSHGGSSGNWSRSGFSELTGSSLKERWSFDSESFGFNCERLVRSSSRFSNSPVDFQACGVCSKLLTEKSSWGTQKIIASNDLSVVSVLICGHVYHAECLESLTPEVNKYDPLCPVCTFGEKYTLKLSEKALKAEMDLKAKNKKSRNQIVDSDIDDNSVAHEHFREKWRQASKGLGIDSSSSGRSSNGKPFLKRHFSFGTRSSKSMLDNQSTPKKGFFWAKSSRE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02744 437 MobiDBLite consensus disorder prediction 56 106 - -
Phac11g02744 437 PANTHER EXPRESSED PROTEIN 1 334 - -
Phac11g02744 437 SUPERFAMILY RING/U-box 266 330 - -
Phac11g02744 437 MobiDBLite consensus disorder prediction 136 167 - -
Phac11g02744 437 MobiDBLite consensus disorder prediction 386 400 - -
Phac11g02744 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 331 IPR013083 -
Phac11g02744 437 MobiDBLite consensus disorder prediction 386 437 - -
Phac11g02744 437 SMART ring_2 271 329 IPR001841 -
Phac11g02744 437 MobiDBLite consensus disorder prediction 410 429 - -
Phac11g02744 437 CDD RING-H2 271 329 - -
Phac11g02744 437 ProSiteProfiles Zinc finger RING-type profile. 271 330 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02744 Phac-Chr11 38565712 38570990 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g02744 11 38565712 38570990 Phac11g02744 11 38565712 38570990 ECH