Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02742 ATGGTGAAGGACACTGCCTACTATGACGTGTTAGGTGTGAATTTTGATGCATCTGCTGCAGATATTAAGAAGGCTTATTATGTCAAGGCAAGAATTGTTCACCCTGATAAAAATCCTGGGGATCCTAAGGCTGCAGAAAATTTTCAGAAACTTGGTGAGGCTTACCAGGTTTTAAGTGACCCCGGGAAGCGTGAAGCATATGATAAAAATGGAAAGGAGGGATTACCGCAAGATTCCATGATGGACCCTACAGCTGTATTTGGAATGATTTTCGGAAGTGAAGTTTTTGAAGAATATATTGGACAACTTGCACTTGCTTCTTTAGCATCTATAGAGATTGATGAAGACATACAGGATCCTGAAGTTCAGAGGCAAAAAATTCAAGAAAAGATGAAGGCATGGCAGAAGGAAAGGGAGCAGAAGCTTTCAGCAATTCTGAAAGACCGGCTTCAACTATCTGTTGTTGGTCAAGAAGAAGAATTCACTGCATGGGCAAAGTCAGAAGCTCGTAGCCTCTCTAAAGCTGCTTTTGGAGAGGCCATGCTACATACAATTGGTTACATCTACACACGGAAAGCTGCAAGAGAAATTGGAAAGGATTTACGGTACATGAATGTTCCCTTTTTGGCTGAGTGGGTCCGAGATAAAGGACACCGTATTAAGTCACAAGTAACAGCAGCCTCAGGAGCTGTGTCCCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAAACCAAGGAGAAAACAAGGAAGAAAACATAATCAAAGCTATTGAAGATAAGAAGGATGCCATGGTTAATTCTCTATGGCAGATCAATGTGATTGATATTGAATCAACTCTGTCACATGTTTGCCAAGCAGTTCTTAAAGATTCTAGTGTCTCCAGAGATGTTCTGAAGGCTCGGGCCAAAGCATTGAAAAAGTTAGGAACCATCTTTCAAGAAACAAGCGGGATGACTAAATGCTGA 966 0.412 MVKDTAYYDVLGVNFDASAADIKKAYYVKARIVHPDKNPGDPKAAENFQKLGEAYQVLSDPGKREAYDKNGKEGLPQDSMMDPTAVFGMIFGSEVFEEYIGQLALASLASIEIDEDIQDPEVQRQKIQEKMKAWQKEREQKLSAILKDRLQLSVVGQEEEFTAWAKSEARSLSKAAFGEAMLHTIGYIYTRKAAREIGKDLRYMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENKEENIIKAIEDKKDAMVNSLWQINVIDIESTLSHVCQAVLKDSSVSRDVLKARAKALKKLGTIFQETSGMTKC* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02742 321 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Phac11g02742 321 SMART dnaj_3 5 63 IPR001623 -
Phac11g02742 321 CDD DnaJ 7 60 IPR001623 -
Phac11g02742 321 Coils Coil 240 260 - -
Phac11g02742 321 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Phac11g02742 321 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 314 - -
Phac11g02742 321 PRINTS DnaJ domain signature 43 63 IPR001623 -
Phac11g02742 321 PRINTS DnaJ domain signature 8 26 IPR001623 -
Phac11g02742 321 PRINTS DnaJ domain signature 63 82 IPR001623 -
Phac11g02742 321 PRINTS DnaJ domain signature 26 41 IPR001623 -
Phac11g02742 321 Coils Coil 124 144 - -
Phac11g02742 321 SUPERFAMILY Chaperone J-domain 2 100 IPR036869 -
Phac11g02742 321 Pfam DnaJ domain 7 68 IPR001623 -
Phac11g02742 321 Pfam X-domain of DnaJ-containing 135 316 IPR026894 -
Phac11g02742 321 Gene3D DnaJ domain 1 86 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02742 Phac-Chr11 38537228 38544892 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g02742 11 38537228 38544892 Phac11g02742 11 38537228 38544892 ECH