Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g02646 ATGTTCACAATTTATATAATTCTCCCTTTTTCATTAGAGAGGTGCGAGTACCTATCAATTGGTGCTTTTGTTGAGAGTTATTTATTTGGGATTGAGGGGGATTTTCGTTCTATGCAAACTTGCGTGGCTTCACAATGCTTTGATGCCTTGGAGACTAGTGTGACAATGTTGAGACTTCTCTTCAAAGGCCAGGATGTGTTACTGCAGAGTCATGATTCAATGTTAAAGGATTACACAACTCAGCTGAAAGATCAACCTGCCAAGCTGGGATCCTTACTGACCAGCTATGCAGAGGGGAGCACAATTGATTCTTTTCGTGTTTCTGACTTTGGTGCATTTGATCAGCCATATCGCGTAGAGGATGCTGTCTGCGTTAGTGGAAACCCAATTTACAACTCACTAAAAGTAAGTAGCCAAACAATTTCTCCGGGTTCTGTTCACATTAGTAGCCTTGGTCAGTTGCCAACTTCACTTGATAAAAGTCCATTGACAAATCAAACAGAGCTGCAGAGGTTGCGATTACAGAAGGTTCAATCATCAAATCCTGACACTATTTTAATTGGTAATACAGATAATCAGGAGGAGTCTGCCATGGCTGATGCCAGTCCCAGGACTGATATTTCTACAGATGTCGACACTGATGACAAAAATCAGCCGTTTGATAGAAATCAATCCCTTGCTGCTGTTTCTGACTCTAGTGACAGGTCGAAAGATAAATCGGATCAAAAGACTCTCCGCAGGCTTGCCCAGAACCGTGAAGCTGCAAGAAAAAGCCGTTTGAGAAAGAAAGCCTATGTCCAACAGTTAGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATCTTCATATCAAGCTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATAAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGACACCGAACTGCGCATGATTGTTGATGGTATATTGGCACATTATGATGAGATTTTTAGGATGAAAGGTGTTGCTGCAAAGGCTGATGTTTTCCATTTGTTGTCTGGTATGTGGAAAACGCCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTGCTGGCAAATCAATTGGAACCTCTTACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAGTCTTCCCAACAAGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCGGAAACACTGTCCACCGGAGCACCTGCCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTCATTCGACAGGCTGACAATCTTCGCCAGCAGACTCTACAACAAATGCACCGGATTCTGACAACTCGCCAATCGGCTCGCGCCCTCCTCGCAATTCATGACTATTTTTCGCGACTGCGTGCTCTGAGTTCACTCTGGCTGGCTCGCCCAAGAGATTGA 1587 0.4512 MFTIYIILPFSLERCEYLSIGAFVESYLFGIEGDFRSMQTCVASQCFDALETSVTMLRLLFKGQDVLLQSHDSMLKDYTTQLKDQPAKLGSLLTSYAEGSTIDSFRVSDFGAFDQPYRVEDAVCVSGNPIYNSLKVSSQTISPGSVHISSLGQLPTSLDKSPLTNQTELQRLRLQKVQSSNPDTILIGNTDNQEESAMADASPRTDISTDVDTDDKNQPFDRNQSLAAVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRMKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g02646 528 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 246 261 IPR004827 GO:0003700|GO:0006355
Phac11g02646 528 Pfam Basic region leucine zipper 239 285 IPR004827 GO:0003700|GO:0006355
Phac11g02646 528 SUPERFAMILY Leucine zipper domain 243 286 IPR046347 GO:0003700|GO:0006355
Phac11g02646 528 Pfam Seed dormancy control 325 400 IPR025422 GO:0006351|GO:0043565
Phac11g02646 528 SMART brlzneu 239 302 IPR004827 GO:0003700|GO:0006355
Phac11g02646 528 MobiDBLite consensus disorder prediction 180 245 - -
Phac11g02646 528 Coils Coil 319 339 - -
Phac11g02646 528 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 241 285 IPR004827 GO:0003700|GO:0006355
Phac11g02646 528 Coils Coil 262 289 - -
Phac11g02646 528 MobiDBLite consensus disorder prediction 180 203 - -
Phac11g02646 528 ProSiteProfiles DOG1 domain profile. 308 525 IPR025422 GO:0006351|GO:0043565
Phac11g02646 528 FunFam BZIP family transcription factor 242 291 - -
Phac11g02646 528 CDD bZIP_HBP1b-like 243 295 - -
Phac11g02646 528 PANTHER TRANSCRIPTION FACTOR TGA9 180 527 - -
Phac11g02646 528 Gene3D - 242 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g02646 Phac-Chr11 37152848 37160033 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac11g02646 DOG1 6.3e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g02646 11 37152848 37160033 Phac11g02646 11 37152848 37160033 ECH