Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00959 ATGGATCCACGTTTGAAGTCCAATTTCATCAACGGTTTTAAACCTAACCAAGTGCCTAACACGGTTGTTGTAGAGGATCAGTTCCTTGTCCCTGTTAATGGGATGATGAGATCCTTTGAGTTTGGATTCCGGGATAACCCATTAATTCTTCCACCTGATCCAAACGTTGCTCAGAACCATGTTTCCTTTGCCACCGATGAGGAGTCTCCATTGGATGAGATTGATTTTTCTGCTACTGTTCTACGCTACATAAACCAAATGCTCATGGAAGAGGACTTGGAGGAAAAGTCGTGTATGTTTCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCATTCTATGAGGTCATTGGTGAGACACACCCTTCTTCAATAAAAACCTATCACGACGTGGACAGCCCTGAGGATAGTAGTTTCAGTGATTATGGCAGCGGTGGTACAGCCACTAGCACTGGTAACTCGATTGAGTCCCATGGGAATAACGTTGATCTTACTGACTATAAGCCTTCCATACTGCAAACCACTTTTCCCACTGACTTTGTTTTCCAGGCCAGTTCAATCCATTCTTATATGAACACCACAAGAAACTTCGGTGTTACCGATAGTGGATTCTTGACAAGTTCCACTGCAGCTGGATTTTTGGATCCAACCTTGTTTAGCAAGAGTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAGGAAGCCAATAAGTTCCTACCTAAAGGGAATCCTTTGGTTATTGACTTGGATAACCCCTCTTTTAGGAAGGTTCCTCCTCTACGGGAGGAAACTAAGGCAGAGAGAGATGAAATTTGTGCTGAGTCAAGGGGAAGGAAGAATCACGAGCGGGAAGATGAAGAAGCAGATTTGCATGATGGGAGAAGCAACAAGCAGTCTGCTGTGTACATTGATGACAGTGAGATATCAGAATTGCTTGATAAGGTTCTGCTGGGCACTAGATGCAGAAATGAGCCAGCTCCTTTGTGTATTTGTTACGCAGACCTTCCTAATGGAGCATCCTTGTGTGCACAGAAGAAATTAGAAGAAACAAACAAGTCTGGTGGTGGGAAGAGCCGTGTTAAGAAACAGGGCAACAAAAAGGAAGTTGTGGATCTGAGGACATTGTTGCTTCTATGTGCACAAGCTGTTTCTTCTGATGATCGTGTAACTGCTAATGAATTACTTAAGCAGATAAGGCAGCATACTTCTCCGCTGGGTGATGGCACTCAGAGGCTGGCCCATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGGACAGGTACTCAGATTTATACTGCTTTATCACACAAAAGAACCTCTGCAGCAGACATGGTGAAAGCTTACCAAATGTATATTTCGGCCTGTCCATTCAAGAAGCTGTCAATAATTTTTGCAAACCATACAATTTTGCAGCTAGCCACAGAAGTTGAATCTCTTCATATTATAGACTTTGGCATCCGTTATGGCTTCCAGTGGCCAGCTCTTATATATCGTCTATCAAAACGACTTGGTGGGCCTCCCAAGCTGCGGATTACCGGGATAGAACTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAGCAGACGGGGCTTCGCCTAGCAAGATATTGTGATCGCTTTAAAGTTCCATTCGAGTTCAATGCCATTGCACAGAAATGGGAAACCATCAAAATTGAGGACTTGAAGATAAAGGAAAATGAACTTCTTGCAGTGAATTCGATGTTTAGATTTCAAAATCTACTTGATGAGACAATTGTGTTGAACAGTCCCCGGGATGCTGTTTTAAATTTAATAAGAAAGGCAAATCCCACTATCTTTATACATGGTACTGTCAATGGGAGCTACAATGCTCCATTCTTTGTAACACGGTTCCGGGAGGCCCTTTTCCATTATTCTACTTTGTTTGATGTGCTTGATACTAATGTCAGTCGTGAAGATCCAATGAGATTGATGTTTGAGAAAGAGTTCTTTGGGCGGCGGGTAATGAATGCTTTAGCTTGTGAGGGTTGTGAGAGGGTTGAGAGGCCCGAGACATACAAGCAATGGCAGGTTAGAAACATGAGAGCTGGATTTAGGCAACTTCCCTTGGATAAACATCTCATCAACAAATTAAGATACAAGTTGAAAGATGTGTACCACAGTGATTTCATGCTTCTTGAAGATGCCAACTTCATGCTGCAAGGTTGGAAGGGCCGAGTAGTTTATGCTTCCTCTTGTTGGGTGCCTGTATAG 2238 0.4366 MDPRLKSNFINGFKPNQVPNTVVVEDQFLVPVNGMMRSFEFGFRDNPLILPPDPNVAQNHVSFATDEESPLDEIDFSATVLRYINQMLMEEDLEEKSCMFHDSLALQAAEKSFYEVIGETHPSSIKTYHDVDSPEDSSFSDYGSGGTATSTGNSIESHGNNVDLTDYKPSILQTTFPTDFVFQASSIHSYMNTTRNFGVTDSGFLTSSTAAGFLDPTLFSKSESVLQFERGVEEANKFLPKGNPLVIDLDNPSFRKVPPLREETKAERDEICAESRGRKNHEREDEEADLHDGRSNKQSAVYIDDSEISELLDKVLLGTRCRNEPAPLCICYADLPNGASLCAQKKLEETNKSGGGKSRVKKQGNKKEVVDLRTLLLLCAQAVSSDDRVTANELLKQIRQHTSPLGDGTQRLAHCFANALEARLAGTGTQIYTALSHKRTSAADMVKAYQMYISACPFKKLSIIFANHTILQLATEVESLHIIDFGIRYGFQWPALIYRLSKRLGGPPKLRITGIELPQPGFRPAERVQQTGLRLARYCDRFKVPFEFNAIAQKWETIKIEDLKIKENELLAVNSMFRFQNLLDETIVLNSPRDAVLNLIRKANPTIFIHGTVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVSREDPMRLMFEKEFFGRRVMNALACEGCERVERPETYKQWQVRNMRAGFRQLPLDKHLINKLRYKLKDVYHSDFMLLEDANFMLQGWKGRVVYASSCWVPV* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00959 745 MobiDBLite consensus disorder prediction 258 294 - -
Phac11g00959 745 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 303 736 IPR005202 -
Phac11g00959 745 ProSiteProfiles GRAS family profile. 363 743 IPR005202 -
Phac11g00959 745 MobiDBLite consensus disorder prediction 137 157 - -
Phac11g00959 745 Pfam GRAS domain family 372 742 IPR005202 -
Phac11g00959 745 MobiDBLite consensus disorder prediction 125 157 - -
Phac11g00959 745 MobiDBLite consensus disorder prediction 258 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00959 Phac-Chr11 6191914 6195565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00959 80 744 GRAS Transcription Factor Family AT1G07530 53.868 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00959 GRAS 5.4e-113 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00959 11 6191914 6195565 Phac11g00959 11 6191914 6195565 ECH
Phac5g02199 5 41308349 41311214 Phac11g00959 11 6191914 6195565 ECH
Phac5g02198 5 41296052 41298580 Phac11g00959 11 6191914 6195565 PCT