Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00958 ATGGAGCACCCAAACTTCTTTGGTGAAGACGAGGGCATACCCCATCTCACAGACTCGCTTGCTTTTCCAACCATGGATCCTTCTTCCAGAGACCCTTCGCTGGAAGACAACGACTTCTCAGAAACTGCCAAGTTCATCAGCCAGATCCTCATGGAAGAGAACGTCGAACACAAGCCGTTCTACGACTCACTCACCTTGCAAGTTACCGAGAAATCCTTCTACGACGCTCTCGCCGGTAACCTACTTCCTTCCTCCAATCAACACCCCCTTGCTTTCAGTCCCGAAGCTGAAACCACCACCACCACCACCACCACCGCTAGCAGCAGTAGCAGCAGCAACAACAGTAACAACAATTTTTCAGATGAAAATTCTGGTGAGTTGAAGCTTCCTTCTCCAGATTCTGTTTTTAAGTTTAACTCCCGCCCGCTTTCTCAACCATCTCCTTCAATTACCGCCAATCATGGGCTCCAAGATTTGGACTTTTCTATTGCCAAACTCTTGTCACAGAATATTTTCAATGATGTTGACTCCGTTTCCCAGTTCAGGCGGGGCTTGGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTAACCTTGTGACTGGTCTAGATTCAAATGGAGAACAGGCGTTCAATAAGTTTGGAGAGACTTCGTATGGGTTGAGGAGTGGGAAAAATCACAAGCGGGATGAGAGATACGCTATAGAAGAAGAAGAACAAGAAGAAGAAGGGAGAAGTAACAAGCAGTCAGCACTTTCCCATGCCGATGAGAGTGACTTGTCAGATGCTTTTGATCGGGTGTTGCTTCATGAAGGAAACATGTGTAGCGAAATCAGTTCTTTGCCAGGTGGAGCAGTGAAGGTTGATGAACCAGATGGAGGGAAGAGCCGTTCAAGGAAACAAGGGAGGAACAAGGAAACAGTTGATTTGAGGAATCTTTTGTTGATGTGCTCACAATCTGTGTATGCCAATGACAACAGGACTGCCAATGAATTGCTAAAGCAGATTAGGCAGCACTCTTCTCCATTTGGGGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGCCCTTGAGGCACGCTTGGTTGGGGATGGTACTGTTGCACAAGGAACTTATTCTTTTCTGGCCTCTAAGAGGTTCTCTGCTGCTGAGTTTCTCAAGGCATACCAGGTTTTTCTTTCCGCCTCCCCTTTCAAGAAGTTTACATATTTCTTTGCGAATAAAATGATTATGAAAGCAGCTGCAAAGGCAGAAACCATCCATATTATTGATTTTGGCATCCTATATGGTTTCCACTGGCCAATTCTTATTAAGTTTTTATCAAATAGAGAGGGTGGTCCTCCCAAACTGAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGCCCCACAGAAAGAATCGAGGAGACTGGTTCCCGTCTGGCTAACTACTGTAAGCGTTACAATGTTCCCTTTGAGTACAATGCCATAGCATCGAGGAATTGGGAAACAATTCAGGTTGAAGCCCTTAAAATTCAGAGCAATGAGCTAGTTGCTGTCAATTGTCATATGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGTGAACAGTCCTAGAAATGCAGTCTTGCAATTGATCAGGAAGATAAATCCAGATATTTTTACTCAGTCCATCACTAATGGATCATATAATGCCCCCTTCTTTGCCACAAGGTTTAGGGAGGCTTTGTTTCATTATTCTGCTATTTATGATATGTGTGACACTGTCATACCTCGTGAAAACGAATGGAGGTTGATGATTGAGAGAGAGCTTCTGGGCCGGGAGGCTATGAATGTTATAGCATGCGAAGGTTCTGAGAGACTTGAGAGGCCCGAGACATACAAACAGTGGCAGGCTAGGAATACAAGGGCTGGTTTCAAGCAGCTCCCATTGAATAAGGAGTTGATGGCCAAATTTAGGACCAAGTTAAAGGAATGGTACCACAGAGATTTTGTCTTTGATGAAGATAACAATTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTGCCGGCATAA 2061 0.4503 MEHPNFFGEDEGIPHLTDSLAFPTMDPSSRDPSLEDNDFSETAKFISQILMEENVEHKPFYDSLTLQVTEKSFYDALAGNLLPSSNQHPLAFSPEAETTTTTTTTASSSSSSNNSNNNFSDENSGELKLPSPDSVFKFNSRPLSQPSPSITANHGLQDLDFSIAKLLSQNIFNDVDSVSQFRRGLEEASKFLPPGPNLVTGLDSNGEQAFNKFGETSYGLRSGKNHKRDERYAIEEEEQEEEGRSNKQSALSHADESDLSDAFDRVLLHEGNMCSEISSLPGGAVKVDEPDGGKSRSRKQGRNKETVDLRNLLLMCSQSVYANDNRTANELLKQIRQHSSPFGDASQRLAHYFANALEARLVGDGTVAQGTYSFLASKRFSAAEFLKAYQVFLSASPFKKFTYFFANKMIMKAAAKAETIHIIDFGILYGFHWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTERIEETGSRLANYCKRYNVPFEYNAIASRNWETIQVEALKIQSNELVAVNCHMRFENLLDESIEVNSPRNAVLQLIRKINPDIFTQSITNGSYNAPFFATRFREALFHYSAIYDMCDTVIPRENEWRLMIERELLGREAMNVIACEGSERLERPETYKQWQARNTRAGFKQLPLNKELMAKFRTKLKEWYHRDFVFDEDNNWMLQGWKGRILYASTCWVPA* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00958 686 MobiDBLite consensus disorder prediction 279 303 - -
Phac11g00958 686 MobiDBLite consensus disorder prediction 1 37 - -
Phac11g00958 686 MobiDBLite consensus disorder prediction 88 127 - -
Phac11g00958 686 ProSiteProfiles GRAS family profile. 300 684 IPR005202 -
Phac11g00958 686 MobiDBLite consensus disorder prediction 216 257 - -
Phac11g00958 686 MobiDBLite consensus disorder prediction 137 151 - -
Phac11g00958 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 238 679 IPR005202 -
Phac11g00958 686 MobiDBLite consensus disorder prediction 88 151 - -
Phac11g00958 686 MobiDBLite consensus disorder prediction 221 251 - -
Phac11g00958 686 MobiDBLite consensus disorder prediction 289 303 - -
Phac11g00958 686 Pfam GRAS domain family 309 683 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00958 Phac-Chr11 6186312 6192350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00958 44 686 GRAS Transcription Factor Family AT1G07530 49.573 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac11g00958 GRAS 2.2e-115 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02199 5 41308349 41311214 Phac11g00958 11 6186312 6192350 PCT
Phac11g00958 11 6186312 6192350 Phac5g02198 5 41296052 41298580 PCT