Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01879 ATGCAAGACCCGACAGCATTCGCAGGTTTGAAGCACCCTCAGTTTCCCGAACAAGAACAACTCAAATGCCCGCGTTGTGACTCCACAAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCACGCCACTTTTGCAAGAACTGCAGAAGGTACTGGACAAAGGGTGGTGCTTTGAGAAACATCCCCGTTGGGGGTGGAAGTAGAAAGACCACAAAACGTTCATCCACCTCAAAACGCTCTTCTGCACCGCCTTCCTCTGCTGTTTCTGAGGCTGACCCGACCCGGATTTGCACCAACCCGGTTGAGCAAGACCATAGGGTGGTCAACATTGGTGGCACCTTCAGTTCGCTGTTGGCTTCATCTGGGCACTTTGGAACCCTCTTGGAGGGTCTGAATCCAACTGGGTCAGATCTCAAAATGGGTGAATTTGGGGAGGGTGTGAGTTCTGACCTGGGTTTGAATTCAAATTCGGGTTCACACCCGGGTTTGCAGCTTCAGAGCAATGGGAGTTCAGAGGGTTTTCTGGGTATGCAGAATGGGGAATCAACCTGTTGGAATGGTGCTCATGGTTGGTCTGATCTTGCAATATACACACCTCGCCCAAGTTTTCAATAG 624 0.5032 MQDPTAFAGLKHPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKTTKRSSTSKRSSAPPSSAVSEADPTRICTNPVEQDHRVVNIGGTFSSLLASSGHFGTLLEGLNPTGSDLKMGEFGEGVSSDLGLNSNSGSHPGLQLQSNGSSEGFLGMQNGESTCWNGAHGWSDLAIYTPRPSFQ* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01879 207 ProSiteProfiles Zinc finger Dof-type profile. 21 75 IPR003851 GO:0003677|GO:0006355
Phac10g01879 207 MobiDBLite consensus disorder prediction 63 97 - -
Phac10g01879 207 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 148 IPR045174 GO:0003700|GO:0006355
Phac10g01879 207 ProSitePatterns Zinc finger Dof-type signature. 23 59 IPR003851 GO:0003677|GO:0006355
Phac10g01879 207 MobiDBLite consensus disorder prediction 70 96 - -
Phac10g01879 207 Pfam Dof domain, zinc finger 19 75 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01879 Phac-Chr10 41220439 41222247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01879 1 131 C2C2-Dof Transcription Factor Family AT1G51700 50.633 2.04e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac10g01879 zf-Dof 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01879 - - gmx:100790822 325.479