Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr9592g00004 ATGGAGCAAGAAGGAGGTGACATGAAGAAGCAACCTCAGGATCAAGGAGTGAAGGAGATGCAACAAGGGGACGCACAGGCTCAACCTCCTCAACAACCCCAAAAGTGCCCTCGATGCGACTCTCTCAACACCAAATTTTGCTACTACAACAACTATAGCCTCTCACAGCCTCGTTACTTTTGCAAAACATGCAGGAGGTACTGGACTCAAGGGGGAACCTTGAGGAACGTTCCCGTCGGTGGCGGTTGCCGCAAGGGGAAACGTGCGAAGAGTTCTCCTTCTCCATCTCCGGCCGAGAATTCTTCTTCCCGGCAACAACAACCGCAAGAGATGGTGATGGTTCAACCCCAACCACCGGTGGTGAGGGCTAAAGACCCTTCTTCAGTTGTGGCTTCACCTTTCTATCAAGGTGGTGGCGGCTACTTGTCTTCTCTGGCTGCTATGCATTCACTGAACCCATCATCATCACACCCTTTTGATCAGTCTCTAAATAGCGACCCCTTGCGTCCTTCCAATTTGGGCCTTCTGTCTGGTTTCCATGTTTCGTCACTCGGCTCGCAGCGCCCAATTGGCTCAATTCGTCCACCCCAGTTGTACCAAATAGGGAGTGGTGAAAGGGAGGTGGTGTCTATGTATGAACAGGGTTTGGTTAATGTTAATCCATCATCTACTATGGCTAATAGCAGTGGTGTTTCTCAGCATGCTTGGACTCAGAGCTTCATCAATAGTAATGCTGCTAATAGGGCCTCTTCTGATGCTTCTTTGTGGAGCACCATCAGCACCACTATTGGTGGTAACTCTGAGAGGACTAGTACTAGTGCTGCTGCTGCTTCATCTTTGGTCCCAAATCAATGGCCTGATCTTCCGGGTGGAATAGAGAATTTCTGGGTTGGGTACTTGGGTCAGTTTTCAGAGTCCCGTTTGTTTTATTTGCAACTGTGCTTTGTGCGCTTTGCTGTTGCGCTAGCTTTAGCTCCTGGCTAA 984 0.4959 MEQEGGDMKKQPQDQGVKEMQQGDAQAQPPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKSSPSPSPAENSSSRQQQPQEMVMVQPQPPVVRAKDPSSVVASPFYQGGGGYLSSLAAMHSLNPSSSHPFDQSLNSDPLRPSNLGLLSGFHVSSLGSQRPIGSIRPPQLYQIGSGEREVVSMYEQGLVNVNPSSTMANSSGVSQHAWTQSFINSNAANRASSDASLWSTISTTIGGNSERTSTSAAAASSLVPNQWPDLPGGIENFWVGYLGQFSESRLFYLQLCFVRFAVALALAPG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr9592g00004 327 MobiDBLite consensus disorder prediction 75 112 - -
Mupr9592g00004 327 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Mupr9592g00004 327 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Mupr9592g00004 327 MobiDBLite consensus disorder prediction 1 36 - -
Mupr9592g00004 327 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 220 IPR045174 GO:0003700|GO:0006355
Mupr9592g00004 327 MobiDBLite consensus disorder prediction 15 36 - -
Mupr9592g00004 327 MobiDBLite consensus disorder prediction 93 112 - -
Mupr9592g00004 327 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr9592g00004 Mupr-Chr9592 31193 32685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr9592g00004 28 96 C2C2-Dof Transcription Factor Family AT5G60200 76.812 1.03e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr9592g00004 zf-Dof 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr9592g00004 - - gmx:102668884 348.977