Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr8021g00005 ATGGGTACGGGGAAAGGGGTTGTTTGGTTAACCAAAGTGGTAGCGTTAGTAGCAATCGCGGCGGTAGCGAGTGTGGGGTTATCAGAGGCCCAACCAGAGGCCAAGTTCAAGTGCGGCACGGAAAACGCCACGTGTAGTTCCCTGATAAGCTACTCGAACCCGAACGGCACGACCCTGGGCGACATCCAAAGCCTGTTCAACGTGAAGCGGGTGATAGACATCGTGGGCGCGAACAAGTTTCCCAGCAACGCCACAAAGAGCTACAAGGTGGTTCCGAACCAGGTTGTTAAGGTCCCGTTCCCGTGCAGGTGCAGGAACAACACGGGGCTGTCGAACGGGGTTCCACTTTACAAAGTAAAAAAGGGGGACACGCTGTACGACATAGCGACTACCACTTTCGCGGGTTTGGTTAAGTGGCCGCAGATCCAGGTGGCGAATAATATACCGGACGTGACAAAAATCAACGTGGGGGTTAAGCTTTATATTCCCCTGCCATGTAGCTGCGATCAGGTGGATGGGAGGAGTGTGGTGCACTATGCGGACCTCGTGGCACCCAATACCACTGTGGAGGGCATTGCAGAGCAGTATGGTACCACCCAGCAGATCCTCCTCGACCTCAATGGGATTACTGACCCCAAATCCCTTCAGGCCGGTCAGATTCTTGATGTCCCCCTCCAAGCTTGTTCGTCGAGTGTGAGAAATGATTCATTGGACTATCCGTTGCTTGTGGCAAGTGGTACTGAGGCCTATACTGCCAATGATTGCGTGAAATGCAAGTGCGAGTCCAGCAACAATTTGACATTACAATGCGAGGCATCACAAGTGAAACCAAGCGGCTGGTCCATTTGCCCCTCTATGGAATGCTCAAGCAACATCTTCATTGGCAACATCACCTCCCCTACAGGTTCCTGCAATCTCACAACCTGTGCCTATACTGGTTATACCTCCCACAATATCTCTGCCCAACTTGTAACGCAGGACATTTGTGCTGTGCCTCCCAGTGCTTCTGGTGGTTCTGGTTCAGGAGCGTCCACCACCACCTTGCCAGGCTTGCTTTGGAGTAATCTTTTCATTCTCATTCACTTCCTCCTCTTTCTTCTCTATGTTTTGTAG 1113 0.5193 MGTGKGVVWLTKVVALVAIAAVASVGLSEAQPEAKFKCGTENATCSSLISYSNPNGTTLGDIQSLFNVKRVIDIVGANKFPSNATKSYKVVPNQVVKVPFPCRCRNNTGLSNGVPLYKVKKGDTLYDIATTTFAGLVKWPQIQVANNIPDVTKINVGVKLYIPLPCSCDQVDGRSVVHYADLVAPNTTVEGIAEQYGTTQQILLDLNGITDPKSLQAGQILDVPLQACSSSVRNDSLDYPLLVASGTEAYTANDCVKCKCESSNNLTLQCEASQVKPSGWSICPSMECSSNIFIGNITSPTGSCNLTTCAYTGYTSHNISAQLVTQDICAVPPSASGGSGSGASTTTLPGLLWSNLFILIHFLLFLLYVL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr8021g00005 370 CDD LysM 117 162 IPR018392 -
Mupr8021g00005 370 Gene3D LysM domain 169 236 IPR036779 -
Mupr8021g00005 370 CDD LysM 183 223 IPR018392 -
Mupr8021g00005 370 Gene3D LysM domain 116 168 IPR036779 -
Mupr8021g00005 370 Pfam LysM domain 188 224 IPR018392 -
Mupr8021g00005 370 Pfam LysM domain 117 163 IPR018392 -
Mupr8021g00005 370 SUPERFAMILY LysM domain 116 164 IPR036779 -
Mupr8021g00005 370 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Mupr8021g00005 370 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 16 330 - -
Mupr8021g00005 370 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
Mupr8021g00005 370 SMART LysM_2 183 224 IPR018392 -
Mupr8021g00005 370 SMART LysM_2 116 163 IPR018392 -
Mupr8021g00005 370 SUPERFAMILY LysM domain 183 224 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr8021g00005 Mupr-Chr8021 32632 35396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr8021g00005 30 319 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 45.548 7.46e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr8021g00005 - - gmx:100804190 511.531